Vibrio pelagius: LZI70_11930
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Entry
LZI70_11930 CDS
T08558
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vpg
Vibrio pelagius
Pathway
vpg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LZI70_11930 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_11930 (uvrB)
DNA repair and recombination proteins [BR:
vpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LZI70_11930 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LZI70_11930 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UTT84379
UniProt:
A0ABY5G2L2
LinkDB
All DBs
Position
1:2614442..2616472
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AA seq
676 aa
AA seq
DB search
MSKLFDLVSDYKPSGDQPTAIAKLLDGLDSGLAHQTLLGVTGSGKTFTLANVISEAQRPA
ILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPKSYLKMMLHVCRGDVIDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEVDCISIFDPLTGVVKQRDLP
RFTVYPKTHYVTPRETILDAIENIKEELRERAQYLKDNNKLLEEQRISQRTQFDIEMMTE
LGFCSGIENYSRYLSGRAEGEAPPTLFDYLPADGLLVIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPMKFDEFEAIAPQTIFVSATPGNYELEKSDGDIADQVVRPTGLL
DPEIEVRPVATQVDDLLSEIRIRSQKEERVLVTTLTKRMAEDLTEYLTEHGVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLHGKAILYGDSITKSMKKAIDETERRRIKQMQYNEEQGITPQALKRNVKDIMEL
GDITKSKKQRQSKQVPLSKVAEEAANYATFSPQELDKAISKLEAEMYQHAQNLEFELAAQ
KRDEIEQMRQQFITNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagctctttgacttggtttctgactataaaccttcaggtgaccaacctaccgct
attgcgaaactgttagacggtttggattctggcttagcgcaccagacgctgctaggtgtg
acagggtcaggaaagacctttaccttggccaatgtcatttctgaagctcagcgaccagct
attttattagcgccaaacaaaaccctggccgcacaactgtacggagagatgaaagccttc
ttcccgaacaacgcagttgagtatttcgtttcttactatgactactatcagccggaagct
tacgtaccaaccactgataccttcattgagaaagacgcgtcggttaacgcacatattgaa
caaatgcgtctctccgcaaccaaggcgctgcttgaacgcaaggatgccattatcgtcgcg
tcagtctccgcgatatatggtctgggtgatcccaagtcttacctaaaaatgatgctgcat
gtctgtcgcggggatgttattgaccagcgagatatcctgcgccgtcttgctgaactgcaa
tactcaagaaacgacgttgcttttgaacggggtcagttccgtgtgcgtggggaagttata
gacattttccctgctgaatcagatcaagatgccgttcgaatcgagatgtttgatgacgaa
gtcgactgtatcagtattttcgacccactaactggtgtggtgaagcagcgagatttgccc
cgttttactgtctacccgaaaacgcactatgtaacgccgcgagaaaccatattagatgcg
attgagaacatcaaagaggagctgcgtgagcgagcacaatacctaaaagacaataataaa
ctgctggaagagcaacgtatttctcaacgtacacagtttgatattgagatgatgaccgag
cttggcttttgttcgggcatcgagaactactctcgatatttaagtggacgtgcggaaggt
gaagcgccaccgactttatttgattacttacctgctgatgggcttttggttattgatgag
tcacacgtaacggtgccgcaaattggtgctatgtataaaggtgaccgctcgcgtaaagag
acgctggtggagtttggtttccgtctgccttcagcactagacaatagaccaatgaagttt
gatgagtttgaggcgattgcgccgcagactatctttgtctctgcgacgccgggcaactat
gaactcgagaagtctgatggtgatatcgctgatcaagtggttcgcccgacggggcttctc
gatcctgaaattgaagttcgtcctgttgctactcaagtcgatgaccttctttctgagatt
cgtatccgttcacaaaaagaggagcgggttctcgtgacaacattaacgaaacgcatggcg
gaagatctcactgagtaccttacagaacatggtgtgaaagttcgttacttacactcagat
atcgatacggtggaacgtgtagagatcatccgagatttgaggctgggtgaatttgatgtg
ttagttggtatcaacttgttgcgagaggggttagatatgcccgaggtttcgctggtggcg
atcttggatgcggataaagagggctttttacgctctgagcgttccttgattcagacgatt
ggtcgtgctgcgcgtaacctacatggtaaggcgattttgtacggcgactcgatcaccaag
tcgatgaaaaaagcgattgatgagacagagcgtcgacgaatcaaacagatgcaatacaat
gaggagcaggggattaccccgcaagcattgaagcgcaatgttaaagatattatggagctt
ggagacatcaccaagtccaagaaacagcgtcagtctaaacaagttccactctcgaaagtg
gctgaagaggcggccaactacgcgacgtttagcccgcaagaacttgataaagcgatcagc
aaactagaagcggaaatgtatcaacatgcccaaaacttggagtttgagcttgccgcgcag
aagcgtgatgagattgaacagatgaggcagcaattcataaccaatagctag
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