Vibrio pelagius: LZI70_11935
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Entry
LZI70_11935 CDS
T08558
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
vpg
Vibrio pelagius
Pathway
vpg02020
Two-component system
vpg02024
Quorum sensing
vpg05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZI70_11935
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZI70_11935
05111 Biofilm formation - Vibrio cholerae
LZI70_11935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vpg02022
]
LZI70_11935
Two-component system [BR:
vpg02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
LZI70_11935
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
HTH_29
AAA_19
HTH_23
AAA_22
HTH_7
HI0933_like_1st
PIF1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UTT84380
UniProt:
A0ABY5G365
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All DBs
Position
1:2616760..2618160
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AA seq
466 aa
AA seq
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MQSKTFDNKSKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGKEAIESLNHRIPDLILL
DLRLPDMTGMDVLFAVKQNFPEVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRI
TVNNAIRKATKLKNSAEHPGSQNYQGFIGSSLTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSVEEGKAFVRFSQEVIDRFNQYEW
PGNVRQLQNVLRNVVVLNNGKEITLNMLPPPLNQPLENSLRLKEKQSEDISVKDIFPLWL
TEKTAIEQAIKACDGNIPRAAGFLDVSPSTIYRKLQAWNAKQSSSE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaaaaacatttgataataaatcgaaatatttgttaatggtagaggatacggcg
tccgttgcggcgttgtatcgatcttacctgacccctttagagatagatatcaatattgtg
ggtacaggcaaagaggcaatagagagccttaaccatagaatcccggacctcattctcctt
gatcttcgtcttccagatatgacggggatggatgttctatttgctgtaaagcaaaacttc
cctgaagttccggtcattttcatgacagcccacggctcgattgataccgccgttgaagcg
atgcgtcacggatctcaagactttttgatcaagccatgtgaggcagatcgtctacgaatt
acagtcaacaatgccattcgtaaagcaactaagctgaagaatagcgctgaacacccgggc
agccagaactatcaaggtttcatcggcagtagcctaaccatgcagcaggtgtatcgcacg
atcgactccgcggcttcgagtaaggcgagcatttttatcaccggtgagagtggtacaggt
aaagaagtgtgtgctgaagctattcatgctgcaagtaaacgtggggacaaaccgtttatt
gccattaactgtgctgctattccaaaagatttgattgagagtgagttgtttggtcacgtt
aaaggtgcgttcacgggcgcagctaccgatcgacaaggtgcagccgagctagccgatgga
ggaactttgttccttgatgagttgtgtgaaatggatcttgagctacaaaccaaattgctt
cgttttatccaaacaggtactttccaaaaagtaggctcttcaaaaatgaagagtgtggat
gtgcgttttgtttgtgcgaccaaccgagacccttggaaagaggttcaagaaggtcgtttc
cgcgaagatttgtattatcgcttgtacgttatcccactgcatctcccacccttgcgcgaa
cgcggtgaagacgttattgagattgcttattcgttgttgggctatatgtcggtggaagag
ggcaaagcgtttgttcgtttctctcaggaagtgatcgatcgattcaaccagtacgagtgg
cccgggaatgtacgtcaattgcaaaacgttttacgaaatgtcgtagtactaaataacggt
aaagagatcaccttgaatatgttgccaccccctcttaaccaaccgttagaaaatagcctg
cgattgaaagagaaacagagcgaagacatctcggttaaggatattttcccactgtggttg
accgaaaaaacagcgatagaacaggcaattaaagcatgcgatggtaatatcccaagggca
gcaggcttcttagatgttagcccatcgaccatttatcgaaaactgcaagcatggaacgca
aaacagtcgtcctcagaataa
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