Vibrio pelagius: LZI70_12280
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Entry
LZI70_12280 CDS
T08558
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vpg
Vibrio pelagius
Pathway
vpg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LZI70_12280 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpg02000
]
LZI70_12280 (msbA)
Enzymes [BR:
vpg01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LZI70_12280 (msbA)
Transporters [BR:
vpg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LZI70_12280 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
APS_kinase
Zeta_toxin
AAA_24
nSTAND3
SLFN-g3_helicase
AAA_29
AAA
AAA_25
G-alpha
DEAD
MMR_HSR1
Glyco_hydro_3_C
TniB
AAA_15
ABC_membrane_2
ATPase
Motif
Other DBs
NCBI-ProteinID:
UTT84447
LinkDB
All DBs
Position
1:2698539..2700287
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AA seq
582 aa
AA seq
DB search
MSIEKDENTWATFKRLWTYIRLYKSGLVVAVVALIINAVSDTYMISLLKPLLDEGFGSAE
SDFLRTLPFIIFAMMFIRGTSGFVATYCLSWVSGNVVMQIRRKIFNHFMHMPVSFFDKEQ
TGSLLSRITYDSEQVSAATSKALVSIVREGASIIGLLVLMFWNSWQLSLVLFAVAPVVAW
AISVVSKRFRKISKNMQTSMGHVASSSEQMLKGHKVVLTYGGQNVEKERFDKVSNQMRQQ
TMKLVTAQAAANPIIQMIASVAIVVVLFLASVDSIKAELTPGTFTVVFSAMFGLMRPLKA
LTGVTAEFQRGMAASQTLFSLIDLETEKNTGTLKPQSVKGDVEVKDITFTYQGAEKAALE
DVSFTIPRGKTVALVGRSGSGKSTIANLFTRFYDVDSGTIELDGHDIRDYELKNLRQHFA
LVSQNVHLFNDTIANNIAYAAEEKYTREQIEHAAKLAHATEFIEGMENGFDTVIGENGTS
LSGGQRQRLAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKNKTVLVIAHRLS
TIEQADEILVVDDGHIVERGAHADLIEHDGAYAQLHRIQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagaaaaagatgaaaatacttgggctaccttcaagcgactttggacttatatt
cgattatacaaatcagggttagtggttgcggttgttgctctaattattaacgcggtttct
gacacatacatgatctctctattgaagcctttgcttgatgaaggtttcggtagcgcagaa
tcagacttcttacgaactcttccgtttattattttcgccatgatgttcattcgtggtacg
agtggatttgttgccacttattgtttgagttgggtttcgggcaatgtagtgatgcaaatt
cgacgcaagatattcaatcactttatgcacatgcccgtctctttttttgataaagagcaa
acgggatcgctgttatcgcgcattacttatgattcggaacaagtctctgctgcaaccagt
aaagctctagtaagtatcgtacgtgagggcgcgagtattatcggcttattagtgttgatg
ttctggaacagttggcagctttcattagtattatttgctgttgctcctgtggtcgcatgg
gcgatcagtgttgtttctaagcgatttagaaaaatatcgaaaaacatgcagaccagtatg
gggcatgtcgcttcatcttctgaacagatgcttaaaggccacaaagttgttttaacttat
ggcggtcaaaacgtggaaaaagagcgttttgacaaagtgagcaaccaaatgcgtcaacaa
acgatgaagttggtaacagcacaagctgcggctaacccaataattcaaatgattgcatcg
gtagcgattgtagttgttctattcttggcaagcgttgactcgattaaagcggaacttacc
cctggtacttttaccgttgtattctcagcaatgtttggtctaatgcgccctttaaaagca
cttacgggtgtgacagcagaattccaacgcggtatggcagcgagtcaaacactgttcagt
ctaattgatttggaaacagagaagaacactggcactctgaagcctcaatctgtgaaaggg
gatgttgaagtcaaagacattacctttacttatcaaggcgcagaaaaggccgctctcgaa
gatgtcagctttaccatccctagaggtaaaacggttgctcttgttgggcgttctggctcg
ggtaaaagtaccattgccaaccttttcacccgtttttacgatgtcgactccggtactatc
gagcttgatggtcatgacattcgtgactacgaactgaaaaaccttcgtcagcactttgca
ttggtttcgcaaaatgttcatttattcaatgatacaatagcgaataatatcgcttatgcg
gcagaagaaaagtacacccgcgaacagatcgaacacgcagcaaaactggctcatgcgact
gaatttatcgagggtatggaaaatggttttgacactgtaatcggtgagaacggtacaagt
ttgtctggtggtcaacgtcaacgtctagctattgcacgagcactattgagagatgccccg
gtgcttatcttagatgaagcaacttcggctctagatacagagtctgagcgtgcaattcaa
tctgctctagatgagctccagaaaaataaaactgttcttgtgattgcgcaccgactatca
accattgagcaagcagatgagattctggttgtagacgatggtcatatcgtcgagcgtggt
gctcatgctgatctgattgagcatgacggcgcctatgctcaacttcaccgcattcaattt
ggtgaataa
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