Vibrio pelagius: LZI70_14020
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Entry
LZI70_14020 CDS
T08558
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_14020 (phrB)
Enzymes [BR:
vpg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LZI70_14020 (phrB)
DNA repair and recombination proteins [BR:
vpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LZI70_14020 (phrB)
Prokaryotic type
LZI70_14020 (phrB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UTT86559
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All DBs
Position
2:complement(53364..54761)
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AA seq
465 aa
AA seq
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MSTLLWIRRDLRVHDNPALISAIENGATHAVFISTPKQWQQHHLAPIKADIIYRHLTLLS
EQLATFGIELVHLKASDFDDQATTLVNYCHEHNITQVVANSEPEVDEQQRDQAVRALDIT
LTTFDCDVIVPVGRVLNQQGEMFKVFTPFKKAWLKYVQASGIDCAPYPHVNSESAQSNRE
TFSREYDFDFPREDSSRWPLADDVLGQVVPQFLAEKLYQYAENRDFPSIKGTSGLSPYLA
IGAISPRWLAIQLIQEHPELLVDTQCAEFSWLNELIWRDFYKHLIFHHPRLVKGENFQEK
YDGLTWHNNPEDFQRWCEGKTGYPLVDAAMRQLLETGWMHNRLRMVVASFLTKHLLVDWR
WGERFFMEHLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQSEKFDPKGIFIRKYLP
ELQNIPDRDVHFPHTFIAKSGQGSRYWGPIVEHKQARLRALEFYK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgagcactctactctggatacgacgcgatcttcgcgttcatgacaatccggctttgatc
tctgcaattgaaaacggcgctactcacgccgtttttatttctacacctaaacagtggcaa
cagcaccatttagcaccgattaaagccgacattatataccgccacttaaccctgctgtca
gaacagctcgcgacatttggtattgagcttgttcatctgaaagcttccgactttgacgat
caagcaactacgcttgttaactactgccacgagcataacatcacccaagtggtcgccaac
tctgaaccagaagtggacgaacagcaaagagatcaagcggtacgtgccctcgacatcaca
ctgaccacctttgattgcgacgtgattgttcccgtaggacgagttctcaatcagcaagga
gagatgttcaaggtatttactcctttcaaaaaggcttggctcaagtatgttcaagcctct
ggcatcgattgcgctccctatccgcacgttaactcggaaagcgcacaatcgaatcgagaa
accttttcaagggagtacgactttgatttcccaagagaagactcttctcgctggccgcta
gctgacgatgtgttagggcaagtggtgcctcaatttcttgctgaaaagctctatcagtac
gcggaaaatcgagattttccatccataaagggcacctctggcctatcgccttaccttgcc
attggtgcgattagtcctcgttggttggcgattcaactgattcaagaacacccagaactg
ctggtcgatacccagtgcgctgagttctcttggctcaatgagcttatctggcgtgatttc
tataaacatctgatcttccaccacccgagattggttaaaggtgagaacttccaagaaaag
tacgatgggctgacctggcacaacaacccggaagatttccagcgctggtgtgaaggtaaa
accggctaccctctggttgatgctgccatgcgccaactgctcgaaacagggtggatgcac
aaccgtctcagaatggtcgtagctagctttttaactaagcacttattggtagattggcgg
tggggcgagcgcttctttatggaacacctgattgatggtgatttcagtgccaacaatggt
ggatggcagtgggctgcgagcactggctgtgatgcacaaccgtactttaggattttcaac
ccgataactcagagtgaaaagtttgatcctaaaggaatttttatccgtaaatatctacca
gaactgcaaaacattcctgatcgagacgtgcatttcccgcatacgtttatcgcgaagagt
ggacaaggcagtcgttactggggacctattgttgaacacaaacaagcacggctaagggcc
ttagaattttacaaatag
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