Vibrio pelagius: LZI70_16180
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Entry
LZI70_16180 CDS
T08558
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
vpg
Vibrio pelagius
Pathway
vpg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LZI70_16180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpg02000
]
LZI70_16180
02044 Secretion system [BR:
vpg02044
]
LZI70_16180
Transporters [BR:
vpg02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LZI70_16180
Secretion system [BR:
vpg02044
]
Type I secretion system
Multiple protein transporter
LZI70_16180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
RsgA_GTPase
AAA_16
nSTAND1
AAA_29
Mg_chelatase
Ferlin_C
Motif
Other DBs
NCBI-ProteinID:
UTT86956
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All DBs
Position
2:540481..542187
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AA seq
568 aa
AA seq
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MDDLKLSPFHSVKREAWAAVGFSMGINLLVLAVPVYSLQLFDRVMSSASIETLFALLGIT
LFLVTSQSALEYIRTLLMQRSALKLDTQLSGQLLDLSISTSSQTNSIDKQPLHDLSTLRN
FLASPSTSSILDLPFTPLFLLLLFFLHPYIGIVAVTGAVVFSLLTVVMMLGGRKVSGVAQ
EETGKVAMELNDFLRNAPTLKAMGMSQNIGKVWEEKNHKVLSLQWLVNARVGLLLAVSRY
FRTLLQVVVLTLGVYLALQQQIGLGAVIASSILIGRVLSPFESAVSGWKSWYSAYQSWSR
LKKCASLTNPSVKTLLPQPRGEIQFNNVSLKFPGAKSPTLQGINFKLGAGHALAVMGNSG
SGKSSLASLLMGIHKPSVGEIKIDGATVEKWDQNQFGQYIGYLPQHVGLLAGTVKQNISR
FSDCNDAEVVSAAKLACIHELIMALPDGYDTYIGEGGILLSGGQKQRIGLARAIYSNPKV
LVLDEPNSNLDPEGETALAIVLQHCKENRITVVMISHRPGFLRQMDWVISLKEGRVEKAG
TCEQFLGLRDGDTINTNNIDQVKEQRRG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttaaaactgagcccttttcatagtgtgaaaagagaggcttgggctgccgtt
ggctttagtatgggcataaatcttctggtgttggcagtaccagtctacagtttacagctg
ttcgatagagtaatgagcagtgcaagtatcgaaaccttgtttgctctgctcggcataacg
ctgtttttggtcacttcccaatctgcacttgaatatatccgaactttgctaatgcaacgg
tctgcgctcaagctagacacgcagctcagtggacagttgttggatctaagtatctctact
tcttctcaaaccaacagtattgataagcaaccgcttcatgatttgagtacgctgcgtaat
tttttagcatcgccatccacgtcttcaattcttgatctcccttttactccactgtttttg
ttattgctgtttttccttcatccgtatattggcatagttgctgtgactggggcggtggtt
ttttctctgctcactgtggtgatgatgttaggtgggcgcaaggtgagtggggtcgctcaa
gaagagacgggtaaagttgcaatggaactcaatgactttttacgtaacgcgccaactctt
aaggcgatgggtatgagtcagaacattggtaaagtttgggaagagaagaatcacaaagtt
ctcagcctacagtggttggttaacgcacgagttggcttactgctggctgtaagtcgttat
ttcagaacattgctacaagttgtggtgttaacactcggtgtttatttggcgttgcaacag
caaatagggctaggcgctgttatcgctagttccatactaattggtcgtgtgctgagtcca
tttgaaagtgccgtcagtgggtggaaatcttggtacagcgcatatcaatcatggagccgt
ctcaaaaaatgcgcttcattgaccaatccatcggttaaaactctgcttcctcaaccacga
ggagagattcaatttaacaatgtctcgctaaagttcccaggtgcaaaatcaccaacgtta
cagggtatcaattttaagttgggtgcggggcatgcactcgcggttatgggtaattctggc
tctggtaaatcatcgttggcgagcctgttgatgggcatacataaaccaagcgttggtgag
atcaagattgatggtgcaaccgttgaaaagtgggaccaaaaccaatttggtcaatacatt
ggttatcttcctcagcatgtcgggttgcttgcaggaaccgtaaagcagaacatctctcga
ttctctgactgtaatgatgcagaggtggtctctgcagcgaagctcgcttgtatacatgag
ttgatcatggcgttgcctgatgggtatgacacctatattggtgaaggtgggattctgctc
tctggcggtcagaagcaacgtatcggcctcgcgcgtgcgatctattcgaatcctaaagtg
ctggttcttgatgaacctaattccaatctcgaccctgaaggtgaaacggcgctcgcaatt
gttcttcagcactgcaaagagaaccgcataacggtagtcatgatctcccatcgccctggc
tttttacgtcaaatggattgggtgatcagtctaaaagagggacgcgtcgagaaagcggga
acgtgtgaacagttcttagggctgagagatggtgacaccatcaacaccaacaatatcgac
caagttaaagagcagcgtagagggtag
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