Vibrio pelagius: LZI70_17885
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Entry
LZI70_17885 CDS
T08558
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vpg
Vibrio pelagius
Pathway
vpg00071
Fatty acid degradation
vpg00280
Valine, leucine and isoleucine degradation
vpg00310
Lysine degradation
vpg00362
Benzoate degradation
vpg00380
Tryptophan metabolism
vpg00410
beta-Alanine metabolism
vpg00640
Propanoate metabolism
vpg00650
Butanoate metabolism
vpg00907
Pinene, camphor and geraniol degradation
vpg00930
Caprolactam degradation
vpg01100
Metabolic pathways
vpg01110
Biosynthesis of secondary metabolites
vpg01120
Microbial metabolism in diverse environments
vpg01200
Carbon metabolism
vpg01212
Fatty acid metabolism
Module
vpg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LZI70_17885 (fadB)
00650 Butanoate metabolism
LZI70_17885 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LZI70_17885 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LZI70_17885 (fadB)
00310 Lysine degradation
LZI70_17885 (fadB)
00380 Tryptophan metabolism
LZI70_17885 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LZI70_17885 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LZI70_17885 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LZI70_17885 (fadB)
00930 Caprolactam degradation
LZI70_17885 (fadB)
Enzymes [BR:
vpg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LZI70_17885 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LZI70_17885 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LZI70_17885 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LZI70_17885 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
AlaDh_PNT_C
CbiA
DAO
Motif
Other DBs
NCBI-ProteinID:
UTT86227
LinkDB
All DBs
Position
2:complement(947106..949247)
Genome browser
AA seq
713 aa
AA seq
DB search
MYQGQHFQVAKRGQFADLIFDAQESPVNILSKEALQDLEQCVEVIRQSDCRGLMIRSNKR
GFSGGANVKAFRELFKGDASVLEEYITWVHSIYNGLEDLPMPKVVVMNNSVVGGSLELAL
LADYRLATEDARLNFPEVKLGILPGWGGVTRMPRIVGLDTALAWTTTGKNYRAEQALKDG
VVDGIIAADQDPIAQAEALLESCLNGDLDWRGRYQEKQAPLMLNDYEVGMSINVAKGMVA
KAAGKHYPAPHIIVDALHKSVKLSRDEAITVELEAFLKCATSGVADALVSVLLNDLDVKA
KTKSIIKGVEASQEVGVIGAGIMGGGVAYVTADKGMDVVLKDINKAGLALGLDEANNLLS
KQVERCRKTPKAMGDTLNRIQPTLHNESLQSTDMVIEAVVENPKVKEAVLAELEQVAPNA
VIASNTSTLMISGLAQALKKPENFCGIHFFNPVPKMPLVEVIRGEKTSDETIQRAVKYVA
QLGKTPIVVNDCAGFLVNRCLAPYFHAFNQLVIDGGDIPTIDKVMSKEFGWPMGPAYLLD
VIGLDTAAHCLDVMDEAFSGRMTKPEKNLIQAMVDIDHYGQKNKQGFFTHTLDRKGRLKP
VANEAADKLVASMAAPTHEFTADDITMRMMLPMMFEAIRCLDEGIIASPGEGDIAMIYGT
GFPPFRGGIFYYMDLMGLDTLLEASEKYAHLGELYQAPAGLVARVENNEKFYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaggacaacactttcaggtcgctaaacgtggccaatttgctgaccttattttt
gatgcacaagagagccctgtaaacattctgagcaaagaagcgctacaggacttggagcag
tgtgttgaagtgattcgccaaagcgactgccgtggtttgatgattcgttctaataagcgc
ggctttagcggcggtgcgaatgttaaagcgttccgtgaactatttaaaggtgacgcaagc
gtacttgaagaatacatcacttgggttcactcgatctacaatggccttgaagatctacca
atgccaaaagtggttgtaatgaacaattctgtggtaggtggcagccttgagctagcacta
ttagcagattaccgtcttgcgacagaagatgcccgccttaacttcccagaagtaaaacta
ggcatcttgccggggtggggtggtgtcactcgtatgccacgtattgttggtctagacacc
gcgctagcttggacgactacaggtaaaaactaccgtgcagagcaagctctaaaagacggc
gttgttgatggcatcatcgcagccgatcaagatccaattgcacaagctgaagcgttactt
gaatcttgtctgaatggtgacttggactggagaggccgttaccaagagaagcaagcgcca
ctaatgctcaacgattatgaagttggtatgtcgatcaatgtcgctaaaggcatggtggct
aaggcggcgggtaaacactacccagcaccacacatcattgtggatgctctgcataaatca
gttaaattaagtcgtgatgaagcgattaccgttgaactagaggctttccttaaatgtgcg
acttcaggtgttgccgatgcgctagtttcagtgttgctcaatgacctagacgtaaaagca
aaaactaagagcatcattaaaggcgtggaggcttcccaagaagttggcgtaatcggtgct
ggcatcatgggtggtggtgttgcttatgtcacggcagacaaaggtatggatgttgtcctg
aaggacatcaacaaagccggtcttgctctaggccttgacgaagccaacaacctgctttct
aagcaagttgagcgttgtcgtaagactccgaaagcgatgggtgacacactgaaccgcatt
caaccaacactgcacaatgaatcacttcagtctactgacatggttattgaagcggtcgtt
gaaaacccgaaagtaaaagaagcggttctggctgaacttgagcaagttgcgccaaatgca
gtcatcgcttcaaacacttcaacattgatgatcagtggccttgcacaagcactgaagaaa
ccagaaaacttctgtggtattcatttcttcaacccagtgcctaaaatgccattggttgaa
gttatccgtggtgaaaaaaccagcgatgaaacgattcaacgcgcggttaaatacgtagcg
cagctgggtaaaacaccaattgtcgttaacgattgtgcgggcttcctagtcaaccgctgt
cttgcaccatacttccacgcgttcaaccaactggttattgatggcggtgatattccaacc
atcgacaaggtgatgagcaaagagttcggttggccaatgggtcctgcttacctgttagac
gtgattggtctagacacggcggctcactgtttggatgtaatggatgaagcgttctcaggt
cgtatgacgaaacctgagaaaaacctaatccaagcgatggtagacatcgaccattacggt
cagaagaacaagcaaggcttcttcacacatactctagacagaaaaggccgtttgaagcca
gtagctaacgaagctgcggataaactagtggcgtctatggctgcaccaactcatgagttt
acggcagatgacatcacaatgcgtatgatgctacctatgatgtttgaagctattcgttgt
ctagatgaaggcatcattgcaagcccaggtgaaggtgatattgcgatgatttacggcaca
ggcttccctccattccgcggtggtatcttctactacatggacctaatgggtctagatacg
ttgctagaagcatccgagaaatacgcacacctaggtgagctatatcaagcacctgcaggt
cttgttgctcgtgttgaaaacaacgagaaattctacgcataa
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