Vibrio pelagius: LZI70_20115
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Entry
LZI70_20115 CDS
T08558
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vpg
Vibrio pelagius
Brite
KEGG Orthology (KO) [BR:
vpg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpg03400
]
LZI70_20115
Enzymes [BR:
vpg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LZI70_20115
DNA repair and recombination proteins [BR:
vpg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LZI70_20115
Prokaryotic type
LZI70_20115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UTT87126
LinkDB
All DBs
Position
p_1:complement(153429..154910)
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AA seq
493 aa
AA seq
DB search
MQTVNIVWFKRDLRLTDHLPLFSALSSDRPTILLYIFEPSLLNNPHYSERHWRFVWQSLE
CMNETLAHHGHQVSVMQGEALECFQEIQSKYRIDTVYSHQEIGLNCTFERDRLLKVWFDA
QSIAWQESQQGAVLRGLANREGWDKNWSLVMRSEILMPELCSEHLHTLDSKQVDYAFIPP
KSWTNLSSGMQTGGSKLAWLTLHDFFNRRGKDYYRNLSSPITSRNACTRLSPYLAWGNIS
LREVYQELLQHWNVPGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCTNTAYEALLSQS
CNVNQNHLMAWKTGNTGFPLVDACMRCLHHTGYINFRMRAMLVSFLTHHMNMDWREGVTH
LAQLFLDFEPGIHYSQFQMQAGVTGINTIRIYNPIKQAQEHDSDGEFVKKWVPELEQVPT
PLIFEPWKMTSMEVAMYQLEQDSPYLDPIFDLNERAREARERLWSWKKRIDVKNEGARIL
ARHVRQTNKRATS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagtcaacatagtatggtttaaacgcgaccttcggctcaccgaccacctccct
ttattcagtgcactatcgtccgatcgcccgacaattttgctctacatattcgagccatca
ctgctcaacaaccctcactactcagaaaggcattggcgatttgtgtggcagtctcttgag
tgcatgaacgaaacgctagctcatcacggacatcaagtctctgtaatgcagggagaggcg
ttagagtgcttccaagagatacaatctaagtaccgaattgataccgtttattcccatcaa
gagatcggcttgaattgtactttcgagcgcgaccgcttgctcaaggtatggttcgatgcc
caaagtatcgcttggcaagagtctcagcagggggccgtcttacgcggattagcaaaccgt
gagggttgggataaaaactggtctttggtcatgcgttctgaaatattaatgcctgaactc
tgtagcgaacacttacatactttagactctaaacaagttgactatgcgttcatccctccc
aaatcatggacgaatttaagtagtggtatgcaaacaggcggaagtaagcttgcatggcta
acacttcacgacttctttaaccgcagaggtaaagactactatcgcaacctttctagccca
atcacatcgagaaatgcttgcacgcgcttgtctccctatcttgcgtggggcaacatctcg
cttcgtgaggtctaccaagagctattgcaacattggaacgtgccgggctttcgtcgtagc
ttaatcgccctatcatctcggctccactggcattgtcatttcatccaaaaattcgaatca
gagtgtgagatggagtttcgttgcaccaatacggcctatgaagcgttgctctcacaatct
tgtaatgtaaaccaaaatcaccttatggcttggaagaccggtaatactggatttcctttg
gttgatgcatgtatgcgctgcttacatcacaccggatacatcaatttccgaatgagggct
atgctggttagtttccttacccaccacatgaacatggattggcgcgaaggcgtgactcac
ctagcccagttatttctcgactttgaacctggtattcactattcccagttccagatgcaa
gctggcgtgaccggcattaataccatccgcatatacaaccctatcaagcaggcacaagaa
catgattcagatggagagtttgtcaaaaagtgggtgcctgagttagaacaagttcctacg
ccattgatattcgaaccgtggaagatgacatcaatggaagtcgcgatgtatcaattggaa
caagattcaccatacctagacccaattttcgatctgaacgagagagcacgcgaagcgaga
gaacgactgtggtcttggaaaaaacgcattgatgttaaaaatgaaggagcacgaatttta
gctaggcatgtacgtcaaaccaataaacgcgcaaccagttga
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