Vibrio parahaemolyticus UCM-V493: VPUCM_0145
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Entry
VPUCM_0145 CDS
T03116
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
VPUCM_0145
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AHI98103
LinkDB
All DBs
Position
1:complement(158684..161005)
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AA seq
773 aa
AA seq
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MSQAICRMIAQELNVRPEQVNAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRTLDSRLS
YLRELDDRRQTILKSIQEQGKLTPELEREITQADSKTRLEDLYLPYKPKRRTKGQIAIEA
GLEPLADTLWNQPQTEPESEATKYLDADKGIADTKAALDGARAIIMERIAEDANLLEKIR
AHLNRNAELVSRVVEGKEQEGEKFKDYFNHNEPLSKVPSHRALAMLRGRNEGFLTLAMNA
DPEQEEGARQSYCETIIADHYGVTLSSAPADAWRKQVISWAWRIKVSMHMETELMGAMKE
RAEIEAIEVFATNLKDLLMAAPAGPRATLGLDPGLRTGSKIAIVDPTGKVLATETIYPHP
PQKQYDKSAQIVDQLVRKYNVDLIAIGNGTASRETDSFVADVIKRGNLKVQKIIVSEAGA
SVYSASELAAKEFPNMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSMLA
KRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSSTIAQNIVDFRDENGRFEARTTLKKVP
RLGPKAFEQCAGFLRIMDGKNPLDASAVHPEAYPVVKAIAEKNSKDIKALIGDSTFLKGL
HAVDYTDEHFGVPTVTDIIKELDKPGRDPRPEFKTATFAEGVNSVADLEPGMILEGVVSN
VANFGAFVDIGVHQDGLVHISALTDRFVSDPREVVKAGDIVKVKVMEVDVQRKRIGLSMR
LNDEPGQDNRSQRSSAAPRRNDQSQRRQPRRDDSSSNNAMGGAFAAAFAKAKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctatctgtcgcatgattgctcaagaactgaatgttcgcccagagcaagtc
aacgctgctgtcaccctgattgatgatggtaacacggtcccatttattgcacgttaccgt
aaagaggtgacaggtggccttgatgatacccaactgcgtactctggacagccgtctgtca
taccttcgcgagctcgacgatcgccgtcaaaccattctgaagtcgatccaagaacaaggc
aaactgacgccagaactagaacgagagatcacgcaagccgacagcaagactcgcctggaa
gacctttacctgccatacaaaccaaagcgccgcaccaaaggccaaatcgcgattgaggct
ggcttagaacctctcgcggatacactttggaaccagccacaaactgaaccagaaagcgaa
gcgacgaaatatcttgatgcggacaaaggcatcgcggataccaaagcggcactggatggc
gctcgcgccatcatcatggagcgcattgctgaggatgcgaacctgcttgaaaaaattcgt
gctcatctaaaccgcaacgcggaactggtttctcgtgtcgttgaaggaaaagagcaagaa
ggcgagaagtttaaagattacttcaaccataacgagccactgagcaaagtgccatcacac
cgtgcactggcgatgttacgaggccgtaatgaaggctttttgacgttggcgatgaacgcc
gacccagaacaagaagaaggtgcacgccaatcgtactgcgaaaccatcattgccgaccat
tatggcgtgacgctaagcagtgcaccggcggacgcatggcgtaaacaagtgatcagttgg
gcatggcgcatcaaagtatcgatgcacatggaaaccgagctgatgggcgcaatgaaagaa
cgtgctgaaatcgaagcgattgaagtgtttgccaccaacctaaaagatttgttgatggca
gcaccggcaggccctcgtgcgacgctgggtctcgatccgggtctgcgtacaggctctaaa
atcgctattgtcgaccctactggtaaagtgcttgcaacagaaaccatctaccctcaccca
ccacaaaagcaatacgacaaatcagcgcaaatcgttgatcagttggtgcgcaaatacaac
gtggatttgattgcgattggtaacggcacggcttcgcgtgaaaccgacagctttgtcgca
gacgtgatcaaacgcggcaacctgaaagttcagaagatcatcgtaagtgaagcgggggca
tcggtttactcagcatctgagcttgcagcgaaagagttcccaaatatggacgtatctctg
cgtggtgcggtgtcgattgctcgtcgtctgcaagacccgctagcggagctcgttaaaatc
gatcctaaatcgatcggtgtgggccaatatcagcacgatgttagccaatctatgctggca
aaacgtcttgatgcgattgtcgaagactgtgtaaacgcggtgggtgttgatgtgaacact
gcctctgcagcgctactgacgcgcgtagcgggcttgtcgagcaccatcgcacagaacatt
gtcgacttccgtgatgaaaacggtcgtttcgaagcacgtacaactttgaagaaagtgcct
cgtttaggtcctaaagcgttcgagcagtgtgcgggtttccttcgtattatggatggtaaa
aacccactggatgcctctgcagtgcacccagaagcctacccagtagtcaaagcgattgcc
gagaagaacagtaaagacatcaaagcactgattggcgattcaacgttccttaaaggtctg
cacgcggtggattacaccgatgagcacttcggtgtcccaacggtaaccgatatcatcaaa
gagctggacaaaccaggccgagaccctcgtccggagttcaaaaccgcaaccttcgctgaa
ggcgttaactcggttgcagatctagaaccgggcatgattctcgaaggcgtcgtatcgaac
gtggccaactttggtgctttcgtcgatattggtgttcaccaagatggtttagtgcacatc
tcagccctgacggatcgtttcgtttctgatccgcgtgaagtggtgaaagcaggtgacatc
gttaaagtgaaagtgatggaagtagacgtacagcgcaagcgtatcggtctatcgatgcgt
ttaaacgacgagccgggtcaagacaaccgcagccaacgctcatccgcagcgccgcgtcgt
aatgatcagtcacaacgtcgtcaacctcgccgtgatgattcctcatcgaacaatgcgatg
ggtggcgcatttgcggctgctttcgccaaggcaaagaagtag
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