Vibrio parahaemolyticus UCM-V493: VPUCM_0387
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Entry
VPUCM_0387 CDS
T03116
Name
(GenBank) Phosphoenolpyruvate-dihydroxyacetone phosphotransferase operon regulatory protein DhaR
KO
K05880
transcriptional activator for dhaKLM operon
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_0387
Transcription factors [BR:
vph03000
]
Prokaryotic type
Other transcription factors
Others
VPUCM_0387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
PAS
GAF
AAA_5
AAA_16
AAA
PAS_4
nSTAND3
AAA_7
PAS_8
TIP49
AAA_22
AAA_14
Bac_DnaA
ABC_tran
RuvB_N
HTH_50
PAS_7
IstB_IS21
NB-ARC
RsgA_GTPase
ATPase_2
ATPase
NTPase_1
AAA_29
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHI98345
LinkDB
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Position
1:complement(404949..406874)
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AA seq
641 aa
AA seq
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MLSIEDTKTKWEFFQKHHWVSPEFSRTPVLESWERCIKQCSPYTWSKPHIASGFTFSSLM
KRNEHLIECATTVLEDTYDMLGDEDLLLMVTDGNGCILSTVGHDSMRQEMQALGIKQGCF
LSEGKIGTNAVNLCIGTHIPCEVFAAEHFNRHLHPYASVAAPVFDQFGKLRGTTCLLKKA
ESYKKENLVIIASSAKEVSLQIHIQSEQENINRLTCAHNATLECMDDGLLAWDEESRITM
VNHQSERLLNIEASQVLDKEVFSVLRFPPNVLNSLESGASINRKLTTVEVRGEFVEAIIT
LRPLNDGTHLLFLHPIDKIRELAQQQIGGNARYTFSTLPVISRKMKHVITVAKRAIKSKS
PILITGEEGVGKATLAMAIHNESAYKEGPFITLNCRSINTEQLVKETLGYDEGQGMPSKF
ELAHGGTLFLEKVEYLSPDLQAVLLKLLKTGLVSRSDSLRLIPVDFQLITSTASEISEYV
TQRSFGRQLYYEISSNELYIPPLRKRKEDIEFLVQQLISHYERRHNVTISIELVALEALM
NFRWSGNNSELRNRTERILLNRSSNLIKLNDIPEDIKLNSRHTAENTPVITLEEAERRAI
VQAWNQCDGKMHDMAKALQIGRTTLWRKINKFGLQEQMKLY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaatcgaagacactaaaaccaaatgggagtttttccagaaacaccattgggta
tctccagaattttcccgcactcccgtacttgagtcgtgggagcgttgcataaagcaatgc
agcccttatacctggtcaaaaccacatattgcctctggctttaccttctcatctctgatg
aaacgcaacgagcacctcatcgaatgcgccactaccgtacttgaagacacttacgacatg
ctaggagacgaagacctgctattgatggtaactgatggcaacggctgtattctctccacc
gtcgggcacgactctatgcgacaagagatgcaggcgctcggtattaaacaaggctgcttt
ctgtctgaagggaaaattggcacaaatgcggtcaatctctgtattggtactcatatcccg
tgtgaagtgttcgcagcagaacatttcaatcgccacttacatccttatgcctctgtagct
gcgcctgttttcgaccagtttggcaagttacgcggcacaacatgccttctcaaaaaagca
gagagctataagaaagaaaacttggtcatcatcgcgtcgagtgcgaaagaagtcagtttg
caaatccatattcagtcggaacaagaaaacattaaccgcctcacttgtgcgcacaacgca
acgttagaatgcatggatgatggccttctggcctgggatgaagaaagccgtatcacaatg
gtaaatcatcaatcagaacgcttgttaaacattgaagccagtcaggttttggataaagaa
gtcttttctgttttacgtttcccgccaaatgtcctcaatagtcttgagtcgggtgcaagc
atcaaccgcaagctcacaacggtagaagttcgtggcgagtttgttgaagcgatcattacc
ttgcgtccactaaacgacggcacgcacttattatttttgcatcccatcgataaaattcgt
gaacttgctcaacaacaaataggtggcaatgcgcgctatacgttcagtactttgcccgtc
atctcacgaaaaatgaagcatgtcattaccgtggcaaaacgggccataaagtccaaatca
ccgattctaattacaggtgaagaaggcgtaggaaaagctactctcgccatggcgattcat
aatgaaagcgcctacaaagaagggccgttcattacactcaactgccgctccatcaataca
gagcaactggtcaaagaaaccctgggctacgacgaaggacaaggcatgccctctaagttt
gaactcgcccatggcggcacgctctttttggaaaaggtggaatatctgtcacccgattta
caagccgtgttacttaagttgttaaaaactgggctcgtcagccgcagcgacagtttgcga
ttgatccccgtagactttcaacttattacgagcaccgcttcagagatcagcgagtatgtc
actcagcgctcattcggccggcaactttattacgaaatctcctcgaacgagctgtatatt
ccgccactacgaaaacgtaaagaagacattgaatttctcgtccagcaacttatcagccat
tatgaacgccgccacaatgtgacgatctcgatagagctagtcgcactggaagcgttgatg
aattttcgttggtcaggcaacaactctgaattaagaaatcgaactgagcgaattttgctt
aaccgcagttccaacttaatcaagctgaacgatattcctgaagacattaaactgaattct
cgccataccgcagaaaatacgccagtaatcacgttagaagaagccgagagaagagctatc
gttcaggcttggaatcagtgtgatggcaaaatgcatgatatggcgaaagcattgcaaatt
ggccgcacgaccttatggagaaaaattaataagtttgggctgcaggagcaaatgaagctg
tattaa
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