KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_0425
Entry
VPUCM_0425        CDS       T03116                                 
Name
(GenBank) Topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vph03032]
    VPUCM_0425
   03036 Chromosome and associated proteins [BR:vph03036]
    VPUCM_0425
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vph02048]
    VPUCM_0425
Enzymes [BR:vph01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VPUCM_0425
DNA replication proteins [BR:vph03032]
 Prokaryotic type
  DNA Topoisomerases
   VPUCM_0425
Chromosome and associated proteins [BR:vph03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    VPUCM_0425
Prokaryotic defense system [BR:vph02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    VPUCM_0425
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C DUF993 HATPase_c_3
Other DBs
NCBI-ProteinID: AHI98383
LinkDB
Position
1:446655..448535
AA seq 626 aa
MTEQYNAGAIEVLNGLEPVRRRPGMYTDTARPNHLGQEVIDNSVDEALAGHASKVQVILH
ADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVN
ALSKRVEVTVRRDGQVYEIAFEHGDKVSDLTVTGTCGRRNRGTSVHFWPDAKYFDSANFS
VTRLVNNLRAKAVLCPGLEITFTDKVNNKDYQWYYEDGLKDYLAEGVKGYPVLPEEPFTG
EFSADTEAANWAVIWQPEGGEMITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNL
LPRGVKLTGDDVFDRCSYVLSVKIQDPQFAGQTKERLSSRQTAAFVSGVVKDAFSLWLNE
KPQLAEQLAEVCIANAHRRMRASKKVVRKKVASGPALPGKLTDCSVQDLNRTEIFFVEGD
SAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDNLDSL
RYGKICILADADSDGLHIATLLCALFTRHFRALVEAGHIYVAMPPLYRIDCGKEVFYALD
DDEKDGILERLSKKKAKINVQRFKGLGEMNPIQLRETTMDPNTRRLVQLTIDDSEATMEM
MDMLLGKKRADDRRSWLQNNGDLAEV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgactgaacaatataatgctggtgccattgaagtactgaatggccttgagccagtacgt
cgccgaccagggatgtatacggatacagcgcgcccaaaccacttgggccaagaagttatc
gataacagtgtcgatgaagcgctagccggacatgcctcaaaagtacaagtcatcctacat
gctgaccaatcactagaagtgatcgatgatggtcgaggcatgcctgttgatatccaccct
gaagagaaagtatctggtgttgagctgatcttatgtaagctccatgcgggtggtaaattc
tccaacaaaaactaccagttttcaggtggtttgcacggtgtaggtatctcagtagtaaac
gcgctgtctaagcgagttgaagtgacggtacgtcgtgatggtcaagtgtacgaaattgct
tttgagcacggtgacaaagtatcagaccttactgtaacgggcacatgtggtcgccgcaat
cgcggtactagcgtgcacttttggccggatgcgaagtatttcgattcagctaacttctct
gtaactcgtttggtgaacaacctacgagcgaaagcggtactttgcccaggtctagaaatt
acgtttaccgataaagtaaacaacaaagactaccagtggtactacgaagatggtttgaaa
gactatctagccgaaggcgtaaaaggttatccagtactaccagaagaaccgtttactggg
gagttttctgcagacacagaagcagcaaactgggcagtaatctggcagccagaaggcggc
gagatgatcaccgaaagttacgtgaaccttatcccaacagctcagggtggtacacacgta
aatggtcttcgccaaggtttgttggatgcgatgcgtgagttctgtgaattccgcaacttg
ctaccacgtggtgtgaagctaacgggcgatgatgttttcgaccgttgttcgtacgtgttg
tcggttaagatccaagatccacagtttgctggtcagactaaagagcgtctttcttctcgt
caaaccgctgcgtttgtctctggtgtggtaaaagatgcattcagtctgtggctaaacgaa
aagcctcaacttgcagagcaactagcggaagtgtgtattgctaacgcgcaccgtcgtatg
cgcgcaagcaagaaagtcgtacgtaaaaaagtcgcatcgggtcctgccttgccaggtaag
ctaacagactgttccgtacaagacttaaatcgcaccgaaatcttcttcgtggagggtgac
tctgcgggtggcagcgcgaagcaagcccgagatcgtgaattccaagcggtaatgccactg
cgtggtaagatcctaaacacatgggaagtctctgccgatcaagttctggcgtctcaagaa
gtgcatgacatctcggttgcgttgggtatcgacccagacagcgacaaccttgacagccta
cgctacggtaaaatttgtatccttgccgatgcggactcggacggtcttcacatcgcaacg
ctattgtgtgctttgtttactcgtcacttccgcgcgctcgttgaagcgggtcatatctat
gtagcaatgccgcctctgtatcgaatcgactgtggtaaagaagtcttctacgccctcgat
gacgatgaaaaagatggcattctagaacgtttgtcgaagaagaaagccaaaatcaacgta
caacgattcaaaggtctgggtgagatgaacccaattcagctacgcgagaccacaatggat
ccgaacacgcgtcgtttggttcaacttacgatcgacgactctgaagccactatggaaatg
atggacatgctgctaggtaaaaaacgcgcagatgaccgtcgttcttggctacaaaacaac
ggcgatttggcagaggtttaa

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