Vibrio parahaemolyticus UCM-V493: VPUCM_0491
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Entry
VPUCM_0491 CDS
T03116
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VPUCM_0491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vph03400
]
VPUCM_0491
Enzymes [BR:
vph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VPUCM_0491
DNA repair and recombination proteins [BR:
vph03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VPUCM_0491
Prokaryotic type
VPUCM_0491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHI98449
LinkDB
All DBs
Position
1:530229..530909
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AA seq
226 aa
AA seq
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MNQSPTWHDVIGEEKKQSYFVDTLNFVEAERAAGKAIYPPAKDVFNAFRFTEFNDVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKTPPSLVNMYKELAQDIEGFQIPQHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDRVIEAINQHQHGVVFLLWGSHAQKKGRFIDRSKH
HVLAAPHPSPLSAHRGFLGCKHFSQANQLLASQGKEPINWHLPLTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcacccacttggcacgatgtgatcggcgaagagaaaaagcagagctacttt
gtagacacgttgaattttgttgaagcagaacgagcagcaggcaaagcgatttacccgcca
gcaaaagatgtttttaacgcatttcgtttcactgagtttaacgatgtgaaagtggtgatc
ttaggacaagacccataccacggtccaaatcaggcgcatggtttgtgcttctcagtgctt
cctggaatcaaaacgccaccgtcgcttgtgaacatgtataaagaattggctcaagatatc
gaaggattccagatccctcagcacggattcttgcaaagctgggcagagcaaggcgtattg
ttgctcaatacggttttgacggttgagcaaggcaaagcgcactcacactctaaaacaggg
tgggaaacattcacagaccgagtgattgaagcgataaaccagcatcagcatggggtcgtg
ttccttttatggggctctcacgctcagaagaaagggcgtttcatcgaccgctcgaagcac
catgtattagccgcgccgcatccatcgccattgtctgctcatcgaggattcttgggttgt
aagcatttctcccaagcaaaccaattacttgcttcgcaaggaaaagagccaatcaactgg
catttaccgttaacggtataa
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