Vibrio parahaemolyticus UCM-V493: VPUCM_0679
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Entry
VPUCM_0679 CDS
T03116
Name
(GenBank) Transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vph03021
]
VPUCM_0679
03009 Ribosome biogenesis [BR:
vph03009
]
VPUCM_0679
Transcription machinery [BR:
vph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VPUCM_0679
Ribosome biogenesis [BR:
vph03009
]
Prokaryotic type
rRNA transcription factors
VPUCM_0679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AHI98637
LinkDB
All DBs
Position
1:738998..740485
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AA seq
495 aa
AA seq
DB search
MSKEILAVAEAVSNEKAVPRERIFEALEIALATSTKKKYEIEIDVRVAIDRKTGEFVTYR
RWLVVDQVESPTKEISLEAAQYEDDSVELGDYVEDEIESVTFDRITTQTAKQVIVQKVRE
AERAQIVEQFIDNEGDLITGVVKKVNRDTIVLDLGNNAEAVILRDDQLPRENFRPGDRVR
GLLYKVAPEARGFQLFITRSKPEMLEELFRVEVPEIAEEIIELKGAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASIIVDE
DAHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNVMTVADLQKKHAEESQASIENFM
KYLDIEEDFAQLLVEEGFSTLEEIAYVPVNELLEIDGLNEELVEELRGRAKDALTTIALA
QEESFEGLEPADDLLGLEGLEREMAFKLAAKGVATLEDLADQGIDDLEGIEGLTEERAGE
LIMAARNICWFGEEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattttagcggtagcagaagcggtatcgaacgaaaaagcggtacctcgt
gagcgtatctttgaagctcttgagattgctctagcaacttctacaaagaaaaagtacgaa
atcgaaatcgacgttcgtgttgctattgaccgtaaaactggtgagtttgtaacttaccgt
cgttggttggttgttgaccaagtagaaagcccaacgaaagagatctctctagaagctgct
caatatgaagatgattcagttgagctaggcgattacgtagaagatgaaatcgaatcagta
acgtttgaccgtattacgactcaaacggctaagcaagttattgtacaaaaagttcgtgaa
gctgaacgtgcacaaatcgttgagcagtttatcgacaacgaaggtgatctaatcactggt
gttgttaagaaggtaaaccgcgacacaatcgttcttgacttaggtaacaacgcagaagct
gtaatcctacgtgatgaccaacttcctcgtgaaaacttccgtccaggtgaccgtgtacgt
ggtcttctgtacaaagttgctccagaagcgcgtggtttccaattgtttatcactcgttct
aagcctgaaatgcttgaagaactattccgtgtagaagttcctgagatcgctgaagaaatc
atcgaactgaaaggcgctgctcgtgatcctggttctcgcgctaagatcgcagtgaaaaca
aatgacaaacgtattgaccctgttggtgcgtgtgttggtatgcgtggcgcacgtgtacaa
gctgtttctggtgagcttggtggtgagcgtatcgatatcgtgctttgggatgataaccca
gcgcaattcgttatcaacgcaatggctccagcagacgtagcttctatcatcgtggatgaa
gatgcacactcaatggacatcgcagttgaagccgacaacctagcacaggctatcggtcgt
aacggtcagaacgtacgtttagcatctcagctaacgggttgggaactgaacgtaatgaca
gttgcagatcttcagaagaaacacgctgaagaatcacaagcgtctatcgaaaacttcatg
aagtacctagacatcgaagaagactttgctcagctgcttgttgaagaaggcttctctact
ctagaagaaatcgcatacgttccagttaacgagcttctagaaatcgacggcctaaacgaa
gagcttgtagaagagctacgtggtcgtgcgaaagacgcgctaacaacaattgcattagca
caagaagaatcttttgaaggtctagagcctgcagacgatctactaggtcttgaaggtcta
gagcgcgaaatggcattcaaactggcagctaaaggtgtagcgacactggaagatctagct
gaccaaggcattgacgatttagaaggtatcgaaggcctgaccgaagaacgtgcaggcgag
ctaattatggccgcacgtaacatctgttggttcggcgaagaagcataa
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