Vibrio parahaemolyticus UCM-V493: VPUCM_0682
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Entry
VPUCM_0682 CDS
T03116
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_0682
Enzymes [BR:
vph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VPUCM_0682
Transfer RNA biogenesis [BR:
vph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VPUCM_0682
Prokaryotic type
VPUCM_0682
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Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHI98640
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All DBs
Position
1:743735..744679
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLEKLEASIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLNELLEQAHREEIAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVLGAPEQGPLRLTMGEERLFIGVGEMNDDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttatcttgttggataaaccaaca
ggtatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgagaaagcg
ggtcacactggtgcgttggaccctctagcgacgggtatgttgccgatctgtttaggtgaa
gcaaccaagttttctcagttcctactggattcagacaaacgctatcgcgtgatcgcgaaa
cttggcgaacgtactaacacttcagactctgatggtgaagtggtagaaacgcgtccagta
gatgtgactctcgagaaactagaagcgagtatcgagaagttccgtggcgaatctgaccaa
gtgccttcgatgttttctgctttgaagtatcaaggcaaacctctgtacgagtacgctcgt
aaaggtatcgaagttccacgtgagtctcgtaaaattacggtatacgaaatcattcttcac
cgttttgaaggtgatgaagttgagatggaggtgcactgttcaaaaggcacttacattcgt
actatcgtcgatgacttgggcgaaatgctcggttgtggtgctcacgtaacgatgctgcgc
cgcacagctgtagccaagtacccttacgagaaaatggtgactcttgagcagcttaatgag
ctgcttgagcaagctcatcgtgaagaaatcgctcctcgcgagttgctcgatccactgctt
atgccaatggacactgcagttgaagacttaccagaagtaaacctaattcctgaattagcg
gatatggttcagcatggccaaccggttcaagtattaggtgcaccagaacaggggcctctg
cgcctgactatgggcgaagagcgtttgtttatcggtgttggtgaaatgaacgatgatggt
aagatcgcaccaaaacgtttagtcgttttccgcgacgaagagtaa
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