Vibrio parahaemolyticus UCM-V493: VPUCM_0814
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Entry
VPUCM_0814 CDS
T03116
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vph03400
]
VPUCM_0814
DNA repair and recombination proteins [BR:
vph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VPUCM_0814
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Lon_C
DnaB_C
GvpD_P-loop
Rad51
AAA
SLFN-g3_helicase
AAA_22
AAA_16
RecA
DUF7125
AAA_14
ABC_tran
Viral_helicase1
NTPase_1
AAA_24
AAA_29
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHI98772
LinkDB
All DBs
Position
1:882772..884046
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AA seq
424 aa
AA seq
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MRIAASPTVARNERLSGYAGSATESKVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGA
AILIGGNPGAGKSTLLLQTMCTLSGLMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSE
TNVDKICQIAEKEQPRIMVIDSIQVMHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVF
IVGHVTKDGTLAGPKVLEHIIDCSVLLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQG
LKEVSNPSAIFLSRGEEETSGSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQN
RLSLLLAVLHKHGGLQMADQDVFVNVVGGVKVTETSADLALVMALLSSFRDRPLPKDVVV
FGEVGLAGEIRPVPSGQERLNEAFKHGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEA
FDEL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcattgctgcttcgccaaccgttgctcgcaatgaacgcttaagcggttatgctggt
tcggcgacagaatcgaaagtccaaaccttatctgaaatcgatctgcaagaagtgccgcga
ttcactagtggttttaaagagctcgatcgtgtgcttggtggtggtgtcgtacctggtgcg
gcgattctgataggtggtaaccctggtgcgggtaagtcgacgttgcttcttcaaactatg
tgtacgttatcagggctgatgccgacactttacgttacgggtgaggaatcgcttcaacag
gttgcgatgcgcgcgtctcgtcttggtctgccaaaagagcacctgaagatgctatcagaa
accaacgtcgataaaatttgccaaattgcagagaaagagcagcccagaattatggtgatt
gactcgatccaggttatgcacgtttctgatgttcaatcgtcaccgggcagtgttgctcag
gtgcgagaatctgcgacggcactgacgcgatacgcaaaacagaacaatgttgcggtattt
attgttggtcacgtaacgaaagatggtactcttgccggccctaaagtccttgagcacatt
attgactgttctgtcttgcttgatggcggaacagatagtcgtttccgtacactgcgcagc
cacaaaaaccgttttggtgcggtaaatgaattaggcgtgtttgcgatgacggggcaggga
ctgaaagaagtaagtaacccatcggcgattttcctttctcgtggcgaagaagagacgtca
ggatcttcggtcatggttgtgtgggaaggtacacgtcctctattagtagagattcaagcg
ctggtggactactcgcaattggcaaaccctcgtcgcgtagcggttggtttggagcagaat
cgtctctccttattattagccgtactgcataagcacggtggtctgcaaatggccgatcaa
gacgtgtttgtgaatgtagtcggcggcgttaaggtaacagaaaccagtgcggatcttgct
ttagtgatggcgttactatcaagctttcgcgatcgtccgttgccaaaagatgtggtggta
tttggcgaagttggtttggctggcgagattcgtccggtacctagtggccaagagcgtttg
aacgaggcatttaagcacggcttcaaaaaggcaattgtcccggctgctaatatgccaaaa
ggtggcattccggggatgcaaatccacggcgttaagaagttgtcagaggctattgaggct
tttgacgagctgtaa
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