Vibrio parahaemolyticus UCM-V493: VPUCM_0941
Help
Entry
VPUCM_0941 CDS
T03116
Name
(GenBank) Membrane-bound lytic murein transglycosylase D precursor
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
VPUCM_0941
Enzymes [BR:
vph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VPUCM_0941
Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VPUCM_0941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM3_NFP
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
AHI98899
LinkDB
All DBs
Position
1:complement(1026425..1028011)
Genome browser
AA seq
528 aa
AA seq
DB search
MRLKYSWALVLLLSGCQLTQPNSSTTPTPETNKSEQTAKQNATKTKSKNKQSLAKDSAKD
TPKVLSPQEQEDVWQRIAMQLEMDIPNNKKVDYYRTWYLKHPNHLYTVSKRAAPFLYMIT
QRIEERGLPMELALLPVVESSFDAFAYSHGSAAGLWQFVPGTGKMMGLEQNYWYDGRRDV
AASTDAALDYLVQLNERFDGNWEHAIAAYNSGGGRVSSAIRKNKKLGKPVDFFSLDLPKE
TSSYVPKLLALADVVANQEKYGIDIPSIPNKPVLTLVDPKEQLDLAIAADYAGIGVKELQ
SYNPAYNQWSTAPEGPHQLLIPVEKKDAFLTQVESNRGKGMKVARYKVKSGDSLSMLAKK
YGTTSKVIRRANGLSNNNIRIGQYLLIPTSTKDDSKYALTAQNRLNKTQSQARGQLKLSH
VVQSGESLWSIARDNKVSHQSLAKWNGMGPKDTLRVGQKLVIWKKSDQGAVIRTVFYNVR
SGDTISGIASKFKVKSNDIVKWNSLHKQKYLKPGQKLKLYVDVTKVSV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaagtatagctgggcgttggtgttgttattatctggctgtcaattgactcag
ccaaattcgtccaccactccaactccagaaactaacaagtcagagcaaactgctaagcag
aatgccactaagactaaatctaaaaacaaacaatctttggcgaaagattctgctaaggat
acgccaaaagttctctcccctcaggaacaagaagatgtgtggcaacgtattgctatgcag
cttgaaatggacatcccaaacaacaagaaagtggattattaccgtacgtggtatttgaaa
cacccaaaccacctgtacacggtatctaaacgtgcagcgccatttctttacatgatcacg
caacgtatcgaagaacgtggattgccaatggagcttgctcttctaccggttgtggaaagc
tcatttgacgctttcgcctactcgcacggtagcgcagcaggtttgtggcagtttgtgcca
ggcaccgggaaaatgatggggcttgaacaaaactactggtatgacgggcgtcgcgatgtc
gctgcctctaccgatgctgcattggattatcttgttcaattaaatgaacgttttgacgga
aactgggaacacgcaatcgcagcctacaatagtggcggcggtcgtgtatctagcgctatc
cgtaagaacaaaaaattgggtaaacctgtcgactttttctctttagatctgccaaaagag
accagtagctacgtgccaaaacttctcgctcttgcggacgtggtggcaaaccaagaaaag
tacggtatcgacattccatctatcccaaacaaaccagtgctgacgttagtcgatccgaaa
gaacaactggatctcgctatcgctgctgattacgcgggcatcggggtaaaagagctgcaa
agctacaaccctgcctacaaccaatggtccaccgcaccagaagggcctcatcagcttctt
attcctgtggagaagaaggatgcgttcttaactcaagttgagagcaatcgcggtaaaggc
atgaaagtcgcgcgttacaaagtcaaatctggcgactcattgagtatgttggcgaagaaa
tacggtacgacctcaaaagtgattcgtcgtgctaacggcctgtcgaacaacaacattcgc
attggtcagtacttacttattccgacgtcaaccaaagacgattcaaagtacgcacttaca
gcgcaaaaccgtttgaacaaaacgcaatcgcaagctcgtggccagctgaaactgtcacac
gttgtgcaatcgggtgaaagtttgtggtctatcgctcgtgacaacaaggtttcacaccaa
tcgctagcaaaatggaacggcatgggaccaaaagataccctgcgcgtcggtcaaaagctg
gtgatttggaaaaaatcagaccaaggcgccgtgattcgtaccgtgttctacaatgttcgc
tctggcgacaccatcagtggcatcgcaagcaaattcaaggtgaagagcaacgacatcgta
aaatggaactcactgcataagcagaagtacctaaaaccgggtcaaaaacttaagctgtac
gtagatgtaactaaggtaagtgtatga
DBGET
integrated database retrieval system
