Vibrio parahaemolyticus UCM-V493: VPUCM_1047
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Entry
VPUCM_1047 CDS
T03116
Name
(GenBank) Putative HTH-type transcriptional regulator ybaO
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_1047
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
VPUCM_1047
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
HTH_27
MarR
NirdL-like_HTH
HTH_IclR
HTH_Crp_2
MarR_2
DDRGK
HTH_34
LexA_DNA_bind
HTH_1
TrmB
HTH_DeoR
DnaD_N
GntR
Rrf2
DprA_WH
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
AHI99005
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Position
1:1142942..1143406
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AA seq
154 aa
AA seq
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MKLDRVDKQLLALLQTDSTLSLNDLAERVNLTTTPCWKRLKRLEEEGYIEKRVALLSAEK
LDLSFIAFVQLKTIDHSEDWYHHFVTTVSDFPEVMEFYRMAGEYDYMMKVLVKDMKCFDE
FYKRLVNSVKGLSNVTSTFAMESIKYTTELPIRS
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatcgggtcgataaacaactgcttgctttgctacaaaccgacagcaccttg
tcattaaatgacttagcagagcgagtcaatctgacaacaacgccatgttggaagcgttta
aaaaggttggaagaggaaggctacattgaaaagcgcgtcgcgttactgagcgcagaaaaa
ctcgacttgtcttttatcgcttttgttcagctaaaaaccatcgatcactccgaagattgg
tatcaccattttgtcacaacagtgagtgatttccctgaggtgatggagttttatcgtatg
gcaggcgagtacgactacatgatgaaagtgctggtgaaagatatgaagtgttttgacgaa
ttttataagcgcttagtgaatagtgtaaaagggctatctaacgtgacttcaacatttgca
atggagtcgattaaatataccactgagttgccaattcgaagctaa
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