Vibrio parahaemolyticus UCM-V493: VPUCM_1117
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Entry
VPUCM_1117 CDS
T03116
Name
(GenBank) Regulatory protein LuxO
KO
K10912
two-component system, repressor protein LuxO
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph02020
Two-component system
vph02024
Quorum sensing
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VPUCM_1117
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_1117
05111 Biofilm formation - Vibrio cholerae
VPUCM_1117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vph02022
]
VPUCM_1117
Two-component system [BR:
vph02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
VPUCM_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
AAA_2
HTH_23
AAA_19
AAA_22
HTH_29
HTH_7
TIP49
PIF1
Motif
Other DBs
NCBI-ProteinID:
AHI99075
LinkDB
All DBs
Position
1:1230958..1232361
Genome browser
AA seq
467 aa
AA seq
DB search
MQQKTEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILL
DLRLPDMTGMDVLHAVKKSHPDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRV
TVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRTIDSAASSKASIFITGESGTG
KEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRF
REDLYYRLYVIPLHLPPLRERGEDVIEIAYSLLGYMSHEEGKNFVRFSQEVIDRFNSYEW
PGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPLDRPSVSKLIEPKAMTVSEIMPLWM
TEKMAIEQAIEACDGNIPRAAGYLDVSPSTIYRKLQAWNGKEERQKV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaaaactgaaggccaaaaatctcgttaccttctgatggttgaggatacagca
tcggttgcggcgttataccgctcgtacctcacgccgttagggatcgacattaatattgtc
ggtacaggtagagatgccattgaaagtctcaatcatcgaattccagatcttattcttctc
gatcttcgtctgcctgatatgacggggatggatgttttgcacgccgttaaaaagagtcat
ccagatgtgccgatcattttcatgacggctcatggctctatcgatacagcggtagaagcg
atgcgtcatggctctcaagactttttgatcaaaccgtgtgaagcagaccgtctgcgtgtt
acggtcaacaacgcaattcgcaaagcaactaagctaaaaaatgaagcagataatccgggt
aatcagaattaccaaggttttatcggcagcagccaaaccatgcagcaggtctatcgcacc
attgactctgccgctagcagtaaagcgagtatctttattactggtgaaagtggtacgggt
aaagaggtatgcgcagaagccatccacgctgcaagcaaacgtggtgataagccgtttatt
gccatcaactgtgcggccatacctaaagacttaatcgaaagtgaactatttggtcacgta
aaaggggcatttactggtgcggcaaatgaccgtcaaggtgccgctgagttagccgatggt
ggcacgttgttcctcgatgaattgtgtgaaatggatttggacttacaaaccaaattattg
cgattcatccaaaccggtactttccaaaaagtaggctcttcaaaaatgaagagtgtggac
gtgcgcttcgtttgtgcgaccaaccgagacccttggaaagaagttcaagaaggacgtttc
cgcgaagacttatactaccggttatacgtgattcctttgcatctcccgcctcttcgcgaa
cgtggtgaagatgtgattgaaattgcgtactcactgttaggctacatgtctcatgaagag
ggcaaaaactttgtccgcttttctcaagaagtgattgatcgctttaacagttatgagtgg
ccgggtaacgtccgacaactacaaaacgtattgcgtaatatcgtggtgctcaacaacggc
aaagaaattacgctagatatgttgccaccgccgctgaatcaaccgttagataggccatct
gtatctaaactgattgagccaaaagcgatgaccgtttcagagatcatgccactatggatg
acagagaaaatggcgattgagcaagcgattgaggcgtgtgacggcaatattccaagagcc
gctgggtatcttgatgtcagtccgtcaacgatttaccgcaaactacaagcatggaatggt
aaagaagagcggcagaaggtgtaa
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