Vibrio parahaemolyticus UCM-V493: VPUCM_1210
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Entry
VPUCM_1210 CDS
T03116
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vph03036
]
VPUCM_1210
03400 DNA repair and recombination proteins [BR:
vph03400
]
VPUCM_1210
Chromosome and associated proteins [BR:
vph03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
VPUCM_1210
DNA repair and recombination proteins [BR:
vph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VPUCM_1210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
WEF-hand
MRP-S27
RmuC
Knl-2-like_dom
SIM_C
MAT1
GTA_holin_3TM
RGS-like
Motif
Other DBs
NCBI-ProteinID:
AHI99168
LinkDB
All DBs
Position
1:complement(1350386..1350793)
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AA seq
135 aa
AA seq
DB search
MSELTKTLLNIRSLRAFSRELTLEQLEEALDKLTTVVEERREAEEAEREALAQQEAKLAE
IAEKIAQDGIDVEALISALSGETKTKAKSKRAPRPAKYKYIDTNGQEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctgactaaaacacttctaaatatccgtagccttcgtgcattttctcgtgag
ctgactctagaacaattggaagaagctctagataaactaactactgttgttgaagagcgt
cgtgaagctgaagaagcagagcgtgaagcactagcacaacaagaagctaagctagcagag
attgcagaaaaaattgctcaagacggtatcgacgttgaagcactaattagcgcactatct
ggcgaaactaagactaaagcaaaatctaagcgcgctcctcgcccagctaagtacaagtac
atcgacacaaatggccaagaaaaaacttggacaggccaaggccgtacaccttctgcaatt
caagagcaacttgacgcaggtaaatcactagacgatttcctaatctaa
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