KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_1210
Entry
VPUCM_1210        CDS       T03116                                 
Name
(GenBank) DNA-binding protein H-NS
  KO
K03746  DNA-binding protein H-NS
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vph03036]
    VPUCM_1210
   03400 DNA repair and recombination proteins [BR:vph03400]
    VPUCM_1210
Chromosome and associated proteins [BR:vph03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    VPUCM_1210
DNA repair and recombination proteins [BR:vph03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      VPUCM_1210
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS DUF3037 WEF-hand MRP-S27 RmuC Knl-2-like_dom SIM_C MAT1 GTA_holin_3TM RGS-like
Other DBs
NCBI-ProteinID: AHI99168
LinkDB
Position
1:complement(1350386..1350793)
AA seq 135 aa
MSELTKTLLNIRSLRAFSRELTLEQLEEALDKLTTVVEERREAEEAEREALAQQEAKLAE
IAEKIAQDGIDVEALISALSGETKTKAKSKRAPRPAKYKYIDTNGQEKTWTGQGRTPSAI
QEQLDAGKSLDDFLI
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtcagagctgactaaaacacttctaaatatccgtagccttcgtgcattttctcgtgag
ctgactctagaacaattggaagaagctctagataaactaactactgttgttgaagagcgt
cgtgaagctgaagaagcagagcgtgaagcactagcacaacaagaagctaagctagcagag
attgcagaaaaaattgctcaagacggtatcgacgttgaagcactaattagcgcactatct
ggcgaaactaagactaaagcaaaatctaagcgcgctcctcgcccagctaagtacaagtac
atcgacacaaatggccaagaaaaaacttggacaggccaaggccgtacaccttctgcaatt
caagagcaacttgacgcaggtaaatcactagacgatttcctaatctaa

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