Vibrio parahaemolyticus UCM-V493: VPUCM_1255
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Entry
VPUCM_1255 CDS
T03116
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00061
Fatty acid biosynthesis
vph00071
Fatty acid degradation
vph01100
Metabolic pathways
vph01212
Fatty acid metabolism
vph02024
Quorum sensing
vph04146
Peroxisome
Module
vph_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VPUCM_1255
00071 Fatty acid degradation
VPUCM_1255
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VPUCM_1255
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_1255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vph01004
]
VPUCM_1255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vph04147
]
VPUCM_1255
Enzymes [BR:
vph01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VPUCM_1255
Lipid biosynthesis proteins [BR:
vph01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VPUCM_1255
Exosome [BR:
vph04147
]
Exosomal proteins
Exosomal proteins of breast milk
VPUCM_1255
Exosomal proteins of breast cancer cells
VPUCM_1255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AHI99213
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All DBs
Position
1:1401682..1403223
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AA seq
513 aa
AA seq
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MMNLAAALQRNAASKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCP
NLPFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHLEDSKAKFYFCFEGTPELPMAKEGMK
AFKEVDACETMIVMTQDQTQKEYQGLPTLTSFIEDIEPLADYVARDADDTCVILYTSGTT
GLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNASVQSGATLVL
VPRFEPKHVLELIEKHRVTLFAGVPTMYIGLLHVEHNYDISSLRVAVSGGSSLPTEVFKT
FEARFNVPILEGYGLSETSPIACFNHLDQERVPGSVGQPIQGVEVKVVDLDGHALPVGEE
GEIIVRGHNVMKGYLDRPEVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFN
VYPREIEEVFMTHPAVAMVAVIGIPHQEYGEEIKAYVVLKPNQFVEADELQLWGREQLAN
FKYPRFVEIREQLPMSATGKILKRELKSELEVA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccttgctgctgccttgcagagaaatgctgcaagtaaaccgaataaaacggct
ttgatatgtggtgataaaaaattcacatacgcagaatttgacgcgattgcaggtaagatc
gcgacttcgatgattaaagcgggcgtcaaaccgggagaccgagtggcgttatcgtgcccg
aatttgcctttctttcctttcgtttattttgcggttcagaaggcgggtgccgttaccgtt
ccgctgaacgtgttgctcaaatctagagaaatcaaataccacctagaagattcgaaagcg
aagttttacttctgttttgaaggaacgcccgaactgccaatggcgaaagaaggcatgaaa
gcgtttaaagaggtggatgcgtgtgaaacgatgatcgtaatgacgcaagatcaaacgcaa
aaagagtaccaaggtttaccgacactgacgtcttttatagaagatatcgaacctttggcg
gattacgttgctcgcgatgcggatgacacttgtgtgattttgtatacatcaggcacaacg
ggactgcccaaaggagcagagctcacgcagcaaaacatcgtaatgaatgcgcttgtggct
cagaacatcatggcgagtcaggctgatgatgttcatctagtaacgttgccactgtttcat
acattcggtcaaaccgtgcatctcaatgctagcgtgcaaagcggtgcaactttggtttta
gtacctcgatttgaaccgaaacatgtgttggagctgatcgaaaagcatcgagtgacactc
tttgccggtgtgcctacgatgtacattggtttgctgcatgttgaacataattacgatatt
tcgtcgctacgagtagctgttagtggaggctcgtcgctaccgaccgaagtatttaagacc
tttgaagcacgattcaatgtaccaattctagaaggttacggcttgtccgaaaccagtccg
atagcgtgttttaatcaccttgatcaagagcgagtaccgggctctgtcgggcaaccgatt
caaggtgttgaggtgaaagtcgttgatcttgacggtcatgctctccctgtcggtgaggaa
ggcgaaattattgttcgcgggcacaacgtcatgaaaggttatcttgaccgcccagaagtg
acggaatcggtgttgcaaagtggttggttccataccggtgacgtcgggcgatttgatgag
tcgggtaatctgtttattgtcgacaggatgaaagacctgatcattcgaggtggcttcaat
gtgtatcctcgtgagattgaagaagtattcatgacgcaccctgcggtagcgatggtggct
gtgataggtattccgcatcaagaatatggcgaagagatcaaagcctatgtggtactaaaa
ccaaatcaatttgtcgaagccgatgagctgcaattatgggggcgagagcagttggccaat
ttcaaatacccaaggtttgtcgaaattcgtgaacagttaccgatgagtgctacgggtaaa
atcttaaagagagagctaaaatcggaactcgaagtcgcttaa
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