Vibrio parahaemolyticus UCM-V493: VPUCM_1256
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Entry
VPUCM_1256 CDS
T03116
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph02020
Two-component system
vph02024
Quorum sensing
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VPUCM_1256
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_1256
05111 Biofilm formation - Vibrio cholerae
VPUCM_1256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_1256
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
VPUCM_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
RepL
TrmB
HTH_24
HTH_11
KORA
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
AHI99214
LinkDB
All DBs
Position
1:complement(1403342..1404034)
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AA seq
230 aa
AA seq
DB search
MEDIKSLLLQCPVLAGLPVEGINEAVQIVRARHFDEKALICSKGAQHSSLMVIAKGSVRV
NSISSKGKEVTLMIFEAGGWFGDNVFSPGMPRIFGATAHTDVTLLELPGDKFRQLLAKYP
QSYPVILDLLSRRLWSAISVIEDDAIRGIEERIGRRLLLLAEYQHNRPISAQSCVVKVTR
EHIANMMGLTRQSVHKVLKKLENSNVLRLQYGSITILNPLKMEAYLKQLE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatcaaatcgttgttgctgcaatgccctgttttagccggtttgccagtggaa
ggaataaacgaagcagtacaaatcgttcgcgcacgacacttcgacgagaaggcactcatt
tgcagtaaaggcgcgcagcactcttcattgatggtgatcgccaaaggatctgtacgcgtt
aactcgataagttccaaaggaaaagaagtcaccttgatgattttcgaagccggaggatgg
tttggcgacaatgtattttcacccggcatgccacgcattttcggagcaacagctcatacc
gacgtaaccctattagagctacctggcgataaatttcggcagttgttagccaaatatcca
caaagctaccctgtgattctggatttgctcagccgcagattatggtcagctatttccgtt
atcgaagacgacgccattcgcggtatagaagagaggatcggcagacgattattgcttctg
gcagaatatcaacataaccgtcctataagtgcccagtcttgtgtagtgaaagtgactcgt
gagcacatcgccaacatgatggggctaacacgacaaagtgttcacaaggtattaaagaaa
ttggaaaactcgaacgttcttaggctgcaatacggcagtattaccatattgaatccactg
aaaatggaagcgtatctcaaacagttggaatag
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