KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_1743
Entry
VPUCM_1743        CDS       T03116                                 
Name
(GenBank) Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV)
  KO
K03230  type III secretion protein V
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vph00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VPUCM_1743
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vph02044]
    VPUCM_1743
Secretion system [BR:vph02044]
 Type III secretion system
  Type III secretion core apparatus
   VPUCM_1743
SSDB
Motif
Pfam: FHIPEP TMEM232
Other DBs
NCBI-ProteinID: AHI99701
LinkDB
Position
1:complement(1874605..1876722)
AA seq 705 aa
MNKLIDILNKVGQRKDIMLAVMLLAIVFMMILPLPTALVDVLIGANMSIAVVLLMLAIYI
TTPLEFSAFPAVLLITTLFRLSLSITTTRLILLQGDAGQIVYTFGNFVVGGNLVVGIVVF
LIITIVQFMVITKGSERVAEVSARFSLDAMPGKQMSIDGDMRAGVIDVHEARHRRSLIEK
ESQMYGSMDGAMKFVKGDSIAGLVIIIVNILGGVTIGVTQKGMSASEALELFAILTVGDG
LVSQIPALFIAITAGIIVTRVSHEDSADLGSDIGGQVTAQPRALLIGGVLLILFALIPGF
PKITFLVLALVVGGGGFYLFYQQKKQTESESSDLPSFVAQGAGSPAAKPNKPTPSRGSKG
KLGEQEEFAMTVPLLIDLDSSLQESLEAVALNDELARVRRALYLDLGVPFPGIHLRFNDG
MKNGEYLIQLQEVPVARGRIEKDKLLVTEGSDQIELLGVPFEQDDDFLPGVSSLWVAQSY
QEKLTASHVGFLTPDRILTFHLSHVLKEYAQDFIGIQETRYLLEQMEGSYSELVKEAQRI
VPLQKMTEILQRLVSEDISIRNLRVILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYA
SGQNMLPAYLLDQSLEDTIRSGIRQTSAGSYLALDPSVTQQFVSDVKQTVGDLSRMPNKP
VLVVSMDVRRYVRKLIESEYYDLPVLSFQELTQQINIQPLGRVGM
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgaataagttgatcgatattctaaacaaggtagggcaacgcaaagacatcatgctcgca
gtgatgttgctggcgatcgtctttatgatgattttgcctttgccaaccgcactagtggat
gtgctgatcggcgcaaacatgagtattgctgtcgtgctgctgatgttggcgatttacatc
accacgccactggagttttcggcgtttccggcagtattgctgatcacgacgctatttcgt
ttgtcgctgtcaatcaccacgacacgtttgatcctgcttcaaggcgatgcgggtcaaatc
gtttacacctttggtaacttcgtcgttggcggcaaccttgtcgttggtatcgtggtcttc
ctgatcatcactattgtacagtttatggtgatcaccaaaggttcggagcgtgttgctgaa
gttagtgctcgattctctcttgatgccatgccgggcaaacagatgagtatcgacggtgac
atgcgcgctggagttatcgatgttcacgaggcacgtcatcgccgttcactgatcgagaaa
gagagccaaatgtacggctcgatggacggcgcaatgaagtttgtaaaaggcgactccatt
gcgggcttggtgatcatcatcgtgaacatcttgggtggcgtcaccattggcgtcacgcaa
aaaggcatgagcgcgtcagaggcgcttgagctgtttgcgattttgaccgtaggcgatggc
ttggtatcgcagattcctgcgctatttatcgcgatcaccgctggtattatcgttacgcgt
gtttcccacgaagactcggccgacttgggctccgacattggcgggcaagtcacggctcag
cctcgtgcactgttgattggtggcgtgctgctgatcttgttcgctcttatccctggcttt
ccgaaaattacattcctagtgctggctttggtggtcggtggcggcggtttttacctcttc
tatcaacagaaaaagcaaaccgaatctgaaagcagcgatctgccgagctttgtcgcgcag
ggagcgggttctcctgccgcaaaacctaataaaccaacgccgtctcgtggtagcaaaggc
aaattgggcgagcaagaagagttcgcgatgacagtgccactgcttatcgatctggattca
agcttacaagaaagcctagaagccgtcgcactgaacgacgaactcgccagagtaagacgc
gcgttgtatctcgatcttggcgtaccgtttccgggaattcacttgcgttttaacgacggg
atgaaaaacggcgaatacttgattcagttgcaagaagtgcccgttgcacgtggtcgtatt
gagaaagacaaattgctggtcacagaaggaagcgaccagattgaattgcttggtgtgcct
tttgagcaagatgacgacttcctcccgggagtctcgagtctttgggtcgcacaaagctat
caagagaagttgactgcgagccatgtcggcttccttacaccagaccgcattttgacgttc
catctatcacacgtattgaaagagtacgcgcaagacttcattgggattcaagaaactcgt
tacctacttgagcaaatggaaggcagttattctgaattggtgaaagaggcgcagcgcatc
gtcccgctacaaaaaatgacggagattttgcaacgtttggtgtctgaggacatttcgatt
cgtaaccttcgcgtcattttggaggccatggtcgagtggggacaaaaggaaaaagatgtc
gtccagttgacggaatacattcgttcaagcttaaagcgttacatctgttacaagtacgcg
agcggtcagaacatgctgccggcgtaccttctcgatcagagcctcgaagacacgattcgc
agcggtattcgacaaacctcggcgggcagctacttagcgcttgacccttcggttacacag
caatttgttagcgacgtaaaacagaccgtaggcgatttaagccgtatgccgaacaagcct
gttctggtggtttctatggatgtacgtcgttatgttcgaaagctgattgaatccgaatat
tacgatttgcccgttctgtcttttcaagagcttactcagcagatcaacattcagccactt
ggacgggtagggatgtaa

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