Vibrio parahaemolyticus UCM-V493: VPUCM_1884
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Entry
VPUCM_1884 CDS
T03116
Name
(GenBank) Microbial collagenase, secreted
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vph01002
]
VPUCM_1884
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vph02042
]
VPUCM_1884
Enzymes [BR:
vph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
VPUCM_1884
Peptidases and inhibitors [BR:
vph01002
]
Metallo peptidases
Family M9
VPUCM_1884
Bacterial toxins [BR:
vph02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
VPUCM_1884
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PKD_4
PKD
PPC
K319L-like_PKD
ChitinaseA_N
Big_9
Bact_surface_Ig-like
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
AHI99842
LinkDB
All DBs
Position
1:complement(2015829..2018273)
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AA seq
814 aa
AA seq
DB search
MELKTLSVAIAATLSSTAAFAMSEPVAQVTEKVEHHQHEHGVETAQPEYAPTELLPQLPK
QTLRTRATQSVEAASVVCDVESFTTTNSNDLISAIKTQGASCINELFAAQSRVQEAAFDS
DHMYNVAKHTVTLAKAYTGGGSDELEALYLYLRAGYYAEFYNNNISFVSWVTPAVQEAVD
AFVNNANFYENSDPHGKVLSEVIITMDSAGLQHAYLPQVTEWLTRWNDQYAQNWYMRNAV
NGVFTILFGGQWNDQYLQTIGNQTELAKALGDFALRESSIGASDEFMVANAGRELGRLTK
YSGSAATTVSSKLKDIFARYQMYGKGDAVWLAAADTVSYYAECSEYGICDFETKLKGLVL
SQTYTCSSTIRILSQNMTQEQHVAACSKMGYEEGYFHQSLETGEQPVADDHNTQLQVNIF
DSSDDYGKYAGPIFDISTNNGGMYLEGDPSKPGNIPNFVAYEASYANPDHFVWNLEHEYV
HYLDGRFDLYGGFGHPTEKVVWWSEGIAEYIANEKDNQAALDTIRDGSTYTLSEVFETTY
DGFDVDRIYRWGYLAVRFMFERHKDDVNQMLVETRQGNWSNYKATINQWANLYQSEFEQW
QQSLVSGGAPNAVITANNEGKVGESITFSSENSTDTDGQIVSVLWNFGDGTASTQTQPTH
QYGSEGQYTVSLTVTDNDGLTATATHDVTVSATGGSSTLPQDCAVQSKVSGGRLNAGEPV
CLSNQQTIWLSVPAVNEHANIAISTGNGTGDLKIEYSNLGWPDGSNLHGWSDNAGNKECI
TVSNQANYWGYIKVSGSFENAAIVVDFDTEACRE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaaccctcagcgtcgcgattgcggcaaccttgagcagcactgctgcgttc
gcaatgagcgagccagtagcgcaagtcacagagaaagttgaacatcatcagcacgaacat
ggtgtagaaacggcgcagcctgagtatgcaccgactgaattgttaccacagctaccgaaa
cagacgttacgtacgcgggctacccaatcggttgaagcggcaagcgtggtttgtgacgta
gaatcgttcacaaccaccaacagcaacgacttgatcagcgcgataaaaactcaaggtgca
agttgcatcaacgagctgttcgctgctcaaagccgagtgcaagaagcggcgtttgattct
gaccacatgtacaacgtggcaaagcatacggtgactttggcgaaggcctatactggcggt
ggtagtgatgagcttgaagctttgtacttgtatttgcgcgctggctattacgccgagttt
tacaacaacaatatctcgtttgtttcttgggtcacgcccgcagtgcaagaggcggtagac
gcgtttgtaaacaacgctaatttttacgaaaacagcgacccgcacggcaaggtattaagt
gaagtgatcatcacgatggacagtgccgggctgcaacacgcttatttaccgcaagtgacg
gagtggctgacgcgctggaatgaccaatacgctcaaaactggtacatgcgtaacgcggtg
aatggggtatttaccatcttattcggcggtcagtggaacgaccaatatttgcaaaccatc
ggtaaccaaaccgaacttgcaaaagcattgggtgactttgcgttgagagagtcctcgata
ggagcgagtgacgagtttatggtggcaaatgcgggtcgtgaattggggcgtctgaccaaa
tattcgggcagtgctgccacaacggtgagtagcaagttaaaagatatttttgctcgctac
cagatgtacggaaaaggggatgccgtttggcttgctgctgcggatacggtctcgtactac
gccgaatgcagcgagtacggaatttgtgatttcgaaaccaagctcaaaggtttggtgtta
tcgcaaacctacacttgtagctcaaccatccgtattctgtcgcaaaacatgacgcaagag
cagcatgtggccgcttgtagcaaaatgggttacgaagaagggtattttcatcaatctttg
gaaactggcgagcagccagtcgctgatgatcataatacacagcttcaagtgaatattttt
gattccagcgatgactacggcaaatacgcggggccaatctttgatatcagtaccaacaac
ggcggcatgtaccttgagggtgacccgtccaagccgggcaatattcctaactttgtcgct
tatgaagcgtcttacgcgaaccctgaccattttgtttggaacttagaacatgaatacgtg
cattacctagatggccgattcgacctttatggcggttttggtcatccaactgaaaaggta
gtgtggtggagtgaaggcattgcagaatacatcgcaaacgaaaaagacaatcaagcggcg
ttagatacaattcgagacggctcaacttacaccttgagcgaggtttttgaaaccacatac
gatggctttgatgttgaccgaatttatcgctggggctatctggccgttcgatttatgttt
gagcgacataaagatgatgtaaaccaaatgctggtggaaacacgccaaggtaattggagc
aattacaaggcgaccatcaatcaatgggcaaacctataccagagcgagtttgaacagtgg
caacagtcattggtttcaggtggcgctcctaatgcagtaataaccgcaaacaatgaggga
aaagtcggtgaaagcattacattcagcagtgaaaacagtacggatacagacgggcaaatc
gtcagtgtgttgtggaacttcggtgatggcacggccagcacacaaacccagccgacgcac
caatatgggagtgaaggtcagtacacggtcagtttaacagtgacagataatgacggtttg
acagctaccgcgacccacgatgtgacggtttcggcgactggcggtagtagtacgcttccg
caagattgcgcggtacaaagcaaagtgagtggtggtcgtttaaatgctggagagcctgtc
tgtttgtcaaatcagcaaaccatttggctgagtgtgcctgcagttaatgaacatgcgaac
attgctatctcaactggcaatggcacgggtgacctcaaaattgaatacagcaacctaggc
tggccagatggttcaaacctacatggttggtcagacaatgctggtaacaaagagtgcata
accgtttcaaaccaagccaattattggggctatatcaaagtctctggcagttttgaaaat
gccgcgattgttgtagattttgacacggaagcttgccgagagtaa
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