Vibrio parahaemolyticus UCM-V493: VPUCM_1891
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Entry
VPUCM_1891 CDS
T03116
Name
(GenBank) putative binding protein component of ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VPUCM_1891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_1891
Transporters [BR:
vph02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
VPUCM_1891
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Beta-prop_EIPR1
Motif
Other DBs
NCBI-ProteinID:
AHI99849
LinkDB
All DBs
Position
1:complement(2024479..2025552)
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AA seq
357 aa
AA seq
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MSRMTKTPLVMLISGMLLGTSAYAEDKLTVVSWGGAFTKSQVEAYHKPFIQKTGVEIVSE
DFSGGLAEIKAQVEANNVRWDLVSLDKPDIVRGCAEGLLEPVNPSILPPGTDGTPAKEDF
IDGAIHECAINTIVVSTVLAVNEDAFKGKAAPTKLTDLFDLTNFPGRRALQKQPQGNLEW
ALLADGVKPDEVYRLLETEEGRARAFAKLDTIKPQVLWWTTGAQPPQMLADKEVVIASAF
NGRIHNARKDEGQPFRIIWDHQMGYMNGWAIPKGSANTKLALDFIAFSSGTKPLADQAKY
VAYGPTRKSSSAEVSPEILANLPTAPQNFKTAFLINDEWWSDYADELNEEFNTWLLN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatgacgaaaacaccactggtgatgttgatttcaggaatgctgttgggtacc
tcggcatacgctgaagataaactaacggtcgtctcatggggtggcgcgttcaccaaaagc
caagtagaggcttaccacaaaccattcatccaaaagaccggtgttgagatcgtatcggag
gatttcagtggcggtttggcggagataaaagcgcaagtagaagcaaacaacgtgcgctgg
gatttggtctcgctggataaaccagacattgttcgaggctgcgcggaagggcttttggaa
cccgtcaaccccagtattctgcctcccggcactgacgggacaccagcaaaagaggatttt
atcgatggggcgatccacgagtgtgcgattaacaccatcgtcgtatcgaccgtcttagcg
gtgaacgaggatgctttcaaaggtaaagcggcaccaaccaagttgacggacctttttgac
ttaacaaactttcccggtcgacgagcgctacaaaagcaacctcaaggtaaccttgaatgg
gcattattggccgatggagttaaacctgacgaagtttaccgcctactagaaactgaagag
gggcgagcacgcgcctttgccaaactcgacaccatcaaaccgcaagtgctttggtggacg
acaggtgcgcagccaccacaaatgttggcagataaagaagtggtaatcgcgtctgctttc
aatggccggatacacaacgcgcgtaaagatgaaggccaaccatttcgcatcatttgggat
caccaaatgggttacatgaacggctgggctattcctaaaggaagcgcgaataccaaactt
gccctcgatttcattgctttttcttcgggtactaagcctttggcggatcaagctaaatac
gtcgcgtatggcccaactcgtaagtcttcttccgcagaagtaagcccagagattctggcg
aacctgccgaccgcgcctcagaactttaaaacggcgtttttgattaacgacgaatggtgg
tctgattatgccgatgagttgaatgaagagttcaatacttggctgcttaattag
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