Vibrio parahaemolyticus UCM-V493: VPUCM_1892
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Entry
VPUCM_1892 CDS
T03116
Name
(GenBank) D-amino acid dehydrogenase family protein in hydroxy-L-proline catabolic cluster
KO
K21060
D-hydroxyproline dehydrogenase [EC:1.5.99.-]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00470
D-Amino acid metabolism
vph01100
Metabolic pathways
Module
vph_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VPUCM_1892
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Gene cluster
GFIT
Motif
Pfam:
DAO
Pyr_redox_2
NAD_binding_8
ApbA
3HCDH_N
Pyr_redox
NAD_binding_2
2-Hacid_dh_C
UDPG_MGDP_dh_N
FAD_binding_2
Pyr_redox_3
NAD_binding_9
F420_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHI99850
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Position
1:complement(2025674..2026930)
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AA seq
418 aa
AA seq
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MLGKEELRNQSIAVIGAGIIGLSIGLKLQQQGYRVTIFDPNGVGNGCSKGNAGHIATEQV
FPLATPALIPQLPKMLLSSTSPVSIRWQDLPNTVGWMIRFLLKAKPSAAEASTQAITSLN
TRAVQSWNLLLDSIGKSGLIKMDGSLLTFESESLFEGYQSTLDALAEQGVRYELWTQNEI
RRRLPELSRKVRFGVFFPETGHTINPYALCVELSNAFEKLGGSLVHEEVDAVSENGDVLV
NTQRMSFDKIVVAAGVHSKALVRQLTGVNVPIQAERGYHLMMNDKRESLPFPISSADRKF
IMTPMSEGLRLAGTVEYADVKSPPNMKRAEMLYQQGNAMFEFGLNPLKQQEKWMGNRPST
IDSLPVIDQCFNGKILLAFGHQHLGLTQAAITADLISELVADKPTSVNIAPFTLQRFA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtaaggaagaactcagaaatcaaagcatcgcggttataggggcgggaatcatc
ggtttgtcgattggcttaaaactgcaacagcaggggtatcgcgtcaccatttttgatccg
aatggagtgggcaatgggtgctcgaaaggtaatgccgggcacatcgcgaccgagcaagtt
tttcctcttgccacgccggccttgatccctcaattacctaagatgttattgagttcgaca
agtccagtttctattcgttggcaagacttgcccaataccgtcggttggatgatacgtttt
ttattgaaagcgaaaccttcagcggcagaagcttccacgcaggcgataacaagccttaac
acgcgagccgttcagagttggaatctgctattagattcgatcggaaaaagtgggctgatt
aagatggatggttcactgctgacgtttgaaagcgaaagcttgtttgaaggttatcaaagt
acgcttgatgcgttagcggaacaaggtgttcggtacgagctttggacgcaaaacgaaatc
cgacgtcgtcttcctgaactcagcagaaaggttcggtttggcgtcttttttccagaaaca
ggacatacaataaacccttatgcactctgcgttgagctaagtaatgcatttgaaaaactc
ggaggttcacttgtccatgaagaagtagacgcagtaagtgaaaacggcgatgtcttggtc
aatactcagcgaatgtcttttgacaaaattgtggtcgcagcgggtgtccattctaaagct
ttggttcgccagttaaccggtgtgaatgtcccgatacaagctgagcgaggttatcatctc
atgatgaatgacaagcgtgagtcattgccgtttcctatcagttctgccgacagaaagttc
attatgacgcccatgtctgaaggcttacgtttggcgggaacggtcgagtatgccgatgtg
aaatcgccaccaaacatgaagcgcgcagagatgttgtatcagcaggggaacgctatgttt
gagttcggtttaaatccgttaaaacagcaggaaaagtggatgggaaatcgaccttcaaca
atcgactcgttgccggtaatcgaccagtgttttaatggcaagatattgctggcatttggt
catcagcacttgggattgactcaagcggcgatcactgcagacctaatctctgagctcgtt
gcagacaagccaacatcggtgaacatcgcgccgttcacactacagcgatttgcctaa
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