Vibrio parahaemolyticus UCM-V493: VPUCM_1982
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Entry
VPUCM_1982 CDS
T03116
Name
(GenBank) Phosphogluconate repressor HexR, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_1982
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
Other families
VPUCM_1982
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
Penicillinase_R
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AHI99940
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Position
1:2128376..2129230
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AA seq
284 aa
AA seq
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MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPMQVNR
AVDLLTQAKRISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSDNDVIV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLEKASSLAITLDIPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGTGFRENLKRVKDALKDSRYDKLSQY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaattcaaaaaaatctggagaatttcagtaagtcagagcgcaaa
gttgcagaagtaattatggcgtctccacaaactgcgattcattctagcattgcaacgtta
gcaaaaatggctgacgtgagtgagcccactgtaaaccgcttctgtcgccgcctggatacc
aaaggtttcccggattttaaacttcacttggctcagagccttgctaacggtacgccatat
gtaaaccgtaatgtggaagaagatgacggcccagatgcatacacgcataagattttcgaa
tcgacaatggcgtgtttggatgttgctaaaaatagcctagacccgatgcaagtaaaccgt
gcggttgacttgctgactcaagcaaaacgtatttctttctttggtcttggtgcgtcttca
tctgttgctcgcgatgctcaaaacaagttcatccgttttaatatcccaattacttgtttt
gaagatattgtcatgcaacgcatgagttgtattaactgcagcgacaacgacgtgattgtt
ctcatttctcatactggtcgtacgaaaagccaagttgaaattgcgaatctggctcgtgag
aacggtgcaactgtcatcgctatcactgcgaaagattctccattagagaaagcaagttca
ctggctatcactttagatattcctgaagatacggacgtatacatgccaatggcaagccgt
gtcgttcaaatgactgttatcgacgtattagccacaggctttacacttcgccgtggtaca
ggtttccgcgaaaacctaaaacgcgtgaaagatgcattaaaagacagtcgttatgacaag
ctaagtcagtactaa
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