Vibrio parahaemolyticus UCM-V493: VPUCM_2002
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Entry
VPUCM_2002 CDS
T03116
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vph03009
]
VPUCM_2002
Enzymes [BR:
vph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
VPUCM_2002
Ribosome biogenesis [BR:
vph03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VPUCM_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AHI99960
LinkDB
All DBs
Position
1:complement(2156143..2156844)
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AA seq
233 aa
AA seq
DB search
MRLDKYLCDALGATRKQATKIIKSGEVLVDGEVQKSGSFKVPEGGVVEWDGREVGAPGPR
YIMLYKPADFVCSHEDGYNPTAFVLLDEPKVENLHFAGRLDVDTTGLVLITDDGQWSHRI
TSPKHKCEKTYRVWLADAIQPDYVEKFAQGIELRNEREATLPAHLEIVNEAENEVLLTIV
EGKYHQVKRMFAALGNKVELLHRERIGDIVLDDTLEPGDYRYLTQEEVDSVWN
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataagtatttgtgtgatgctctgggtgcgactcgcaagcaggcaacaaag
atcatcaaaagtggcgaagtgctcgtcgatggcgaagtacaaaaaagtggttcattcaaa
gtgccagaaggtggtgttgtagaatgggatggccgagaagtcggtgcgccagggcctcgt
tacatcatgttgtacaaaccagcggattttgtttgttcacacgaagatggttacaaccct
acggcctttgtattacttgatgaacctaaagtcgaaaaccttcacttcgctggccgttta
gatgtggacacgacgggtttggtgttgattacagatgatggccaatggtctcaccgtatt
acatcaccgaaacacaaatgcgaaaaaacataccgcgtgtggctagcggatgcgattcaa
cctgattacgttgaaaagtttgcgcaaggtattgagttgagaaacgaacgcgaagcgacg
ttaccagcgcaccttgagatcgtgaatgaagcagaaaacgaagtactgcttactatcgtt
gaaggtaagtaccaccaagtgaaacgcatgtttgctgcacttggtaacaaagtagaacta
cttcatcgtgagcgaatcggcgatatcgtgttggatgacactctagaaccgggtgattac
cgttatctgactcaagaagaagtggattctgtgtggaattaa
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