Vibrio parahaemolyticus UCM-V493: VPUCM_20070
Help
Entry
VPUCM_20070 CDS
T03116
Name
(GenBank) Transcriptional regulator KdgR, KDG operon repressor
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_20070
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VPUCM_20070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
MarR_2
Fe_dep_repress
HTH_5
HTH_11
TrmB
Mga
HTH_45
HTH_24
Rrf2
Dimerisation
HTH_DeoR
GerD
FUR
Motif
Other DBs
NCBI-ProteinID:
AHJ01191
LinkDB
All DBs
Position
2:complement(68189..68971)
Genome browser
AA seq
260 aa
AA seq
DB search
MEKSTQPEAVSSVLKVFHILQALGEQKAIGVSELSQRLMMSKATTYRFLQTMKSLGYVSQ
EGEADKYSLTLKLFELGAKSLEYVDLIELADKEMRHISEQTNEALHLGALDENAIIYIHK
IDSGYNLRMQSRIGRRNPLYSTAIGKVLLSERDESFVRDVLSDVEFIKHTEKTLENTDQV
LEELAKVRDFHYAEDNEEQEPGLRCIAAPIYDRFGQIIAGLSISFPTIRFDEERMEYYVG
LLHQAGKNISEQLGYHDYPA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtcgactcagcctgaagcggtttcgtcagtacttaaggtttttcatattctt
caagcacttggtgaacagaaagccatcggcgtttcagagctttcacaacgtctaatgatg
tcgaaagcgactacttaccgttttctgcaaaccatgaaatcgctcggttacgtgtctcaa
gaaggcgaagcggataagtactctctaacacttaagctgttcgagttgggcgcaaaatcg
cttgagtacgtcgatctgatcgaactggccgacaaagaaatgcgccacatttcagaacaa
accaacgaagccttgcaccttggtgcgctggatgaaaatgccatcatttacatccacaaa
atcgactctggctacaacctacgcatgcaatcgcgcatcggtcgtcgcaatccgctctac
agtactgcgattggtaaagtgctgctttctgagcgcgatgaaagcttcgttcgtgacgta
ttgagcgatgtcgagttcattaagcacacagaaaaaacattggaaaacaccgatcaagtg
ctagaagaattggcgaaagtgcgcgatttccactatgcagaagataacgaagagcaagaa
ccaggtcttcgttgtatcgctgcgccgatttatgaccgctttggtcaaatcattgctggc
ttgtctatctcattcccaaccatccgtttcgatgaagagagaatggaatattacgtcggc
ttactgcatcaagcaggtaaaaacatttctgagcaattgggttaccacgattacccggca
taa
DBGET
integrated database retrieval system
