Vibrio parahaemolyticus UCM-V493: VPUCM_20239
Help
Entry
VPUCM_20239 CDS
T03116
Name
(GenBank) Outer membrane protein A precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_20239
Transporters [BR:
vph02000
]
Other transporters
Pores ion channels [TC:
1
]
VPUCM_20239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
MipA
DUF3187
Motif
Other DBs
NCBI-ProteinID:
AHJ01360
LinkDB
All DBs
Position
2:255321..256298
Genome browser
AA seq
325 aa
AA seq
DB search
MKKIAIAVATVLAGGVISNVALADTYIGGKVGYNSLNDACYLNEPCDDDSFAAGMHIGYN
FNEYVAAEYGVDYLGDFTANFKKPGLNTVDGDLWALTLAPKFNLPLTDSWNLFAKVGAAY
MMAGDEKDFIPTGSLGAEYKINYNWSLRAEYQRYQDMSDDIIDDMDSDFFGIGFNYKFGS
EPVVQEEAVEEVVETRPSTRIVEHVYPAQTATVQFGLESAEVKDASALSGTVDLMNTYPQ
AKVEITGYSDTTGSAQYNQQLTEKRAKAVANEFEAKGIAADRMTVKGMGEANPVASNETR
QGREANRRVEVVVPAFEYQTTEQAQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcgctattgcagtggctactgtacttgctggtggtgtgatctctaacgtt
gcacttgctgacacttacattggcggtaaagtaggttacaactctctaaacgatgcatgt
tacctaaacgaaccatgtgacgacgacagtttcgcagctggtatgcacattggttacaac
ttcaacgaatacgttgctgcagaatacggtgttgattacctaggtgatttcacggctaac
ttcaaaaagcctggtctaaacacagttgatggtgacctttgggcgttgactctagctcct
aaattcaacctacctctaacagattcttggaacctgttcgctaaagtaggtgcggcatac
atgatggctggtgacgagaaagacttcattccaactggctctctaggtgctgagtacaaa
atcaactacaactggagcctacgtgctgaataccaacgttaccaagacatgtctgacgac
attattgatgacatggattctgacttcttcggtatcggcttcaactacaagtttggttct
gagccagtagttcaagaagaagcagttgaagaagtggtagaaacacgcccatctactcgt
atcgttgagcacgtgtacccagctcaaacagcaacagtacaattcggcctagaaagcgca
gaagtgaaagatgcatcagcactttctggtacagttgatctaatgaacacttacccacaa
gctaaagttgagatcactggttacagtgacacaacgggttctgctcagtacaaccaacag
ctaactgaaaagcgtgctaaagcggttgctaatgaatttgaagcgaaaggtatcgctgct
gaccgtatgacagttaaaggcatgggtgaagcaaacccagttgctagcaacgaaactcgt
caaggtcgcgaagcgaaccgtcgtgtagaagtagttgttcctgcgtttgaataccaaacg
actgaacaagctcaataa
DBGET
integrated database retrieval system
