Vibrio parahaemolyticus UCM-V493: VPUCM_20275
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Entry
VPUCM_20275 CDS
T03116
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VPUCM_20275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vph03019
]
VPUCM_20275
03110 Chaperones and folding catalysts [BR:
vph03110
]
VPUCM_20275
03029 Mitochondrial biogenesis [BR:
vph03029
]
VPUCM_20275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vph04147
]
VPUCM_20275
Enzymes [BR:
vph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VPUCM_20275
Messenger RNA biogenesis [BR:
vph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VPUCM_20275
Chaperones and folding catalysts [BR:
vph03110
]
Heat shock proteins
HSP60 / Chaperonin
VPUCM_20275
Mitochondrial biogenesis [BR:
vph03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VPUCM_20275
Exosome [BR:
vph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VPUCM_20275
Exosomal proteins of other body fluids (saliva and urine)
VPUCM_20275
Exosomal proteins of breast cancer cells
VPUCM_20275
Exosomal proteins of colorectal cancer cells
VPUCM_20275
Exosomal proteins of bladder cancer cells
VPUCM_20275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AHJ01396
LinkDB
All DBs
Position
2:287337..288935
Genome browser
AA seq
532 aa
AA seq
DB search
MAAKDVLFANDARQKMLKGVNLLADAVKVTLGPKGRNVVLDKSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGI
DKATEAAVEKLREMSKPCSDKESITQVGSISANSDRAIGEIIAEAMEKVGRNGVITVEEG
QGLDNELSVVEGMQFDRGYLSPYFITNQENGSVELDNPYILLVDKKVSSIRELLPVLEEV
AKSSRSLLIIAEDIEGEALATLVVNNMRGIVRATAVKAPGFGDNRKAMMEDIAVLTAGTV
ISEEIGLELEKATLEQLGSAKKVTITKDTTTIVGGAAEASAIADRVASIEKQIETTTSQY
DKDKLQQRVAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALT
KIAKELADLKGDNDDQNVGIRVALRAMEEPLRQIATNAGDEASVVANAVKAGDADYGYNA
AKGEYGNMIEMGILDPAKVTRSALQFAASVAGLMITTEAMITNHVEDKELDI
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtattatttgctaatgacgcacgtcaaaaaatgctgaaaggtgtg
aacttactggcggacgcagtaaaagtgacactaggccctaaaggccgcaacgttgtgctt
gataaatcttacggcgcgccaacgatcactaaagatggcgtgtctgtagcgaaagaaatc
gaactgaaagacaagttcgaaaacatgggcgcacaaatggtgaaacaagtggcgtccaaa
gcgaatgatgaagcgggtgacggtacaacgacggctaccgtactggcgcaatctttcatc
aatgaaggtcttaaagcggtagcctctggcatgaacccaatggacctaaaacgtggtatc
gacaaagccactgaagcggcggttgagaaactacgtgaaatgtctaagccatgcagcgac
aaagaatccatcacccaagtgggtagcatttctgcaaacagcgatcgcgcgattggtgaa
atcattgcagaagcgatggaaaaagtgggtcgcaatggcgtgattacggtggaagaaggc
caaggtctagacaacgaattgtctgtggttgaaggtatgcaattcgaccgcggttacttg
tcgccatacttcatcactaaccaagaaaatggcagcgtagagctagacaacccttacatc
ctattggtggacaaaaaagtcagcagcatccgcgagctattgccagtgctagaagaagtg
gcgaaatcttctcgctcgctattgatcattgctgaagacatcgaaggtgaagcgctagcg
acattggttgtgaacaacatgcgtggcatcgtgcgtgcgacggcggtgaaagcacctggt
tttggtgacaaccgtaaagcgatgatggaagacattgcggtactaaccgcaggtacggtc
atctctgaagaaatcggcctagagcttgaaaaagcaacgctagagcaactaggtagcgcg
aagaaagtgaccatcaccaaagacacaacaaccatcgtgggtggcgcagcagaagcaagc
gcgattgctgatcgtgtggcttcgattgaaaaacaaatcgaaacaaccacttctcaatac
gataaagacaagcttcaacaacgtgttgcgaagctttctggcggcgtagcggtgatcaag
atcggcgctgcaaccgaagttgagatgaaagagaagaaagaccgcgtggatgatgcgcta
cacgctactcgcgcagcggttgaagaaggtattgttgctggtggtggtgttgctctaact
aagatcgcgaaagaattggcggatctaaaaggcgacaacgatgaccaaaacgtgggtatc
cgagttgcgctacgtgctatggaagagcctcttcgtcaaatcgcaaccaacgcaggtgac
gaagcttcagttgtggcgaatgctgtcaaagcgggtgatgccgattacggttacaacgct
gcgaaaggtgaatacggcaacatgatcgaaatgggtatcttggaccctgcgaaagtaaca
cgctcagcgcttcaattcgcagcgtctgttgctggcttgatgatcaccactgaagcgatg
atcaccaaccacgttgaagacaaagaacttgatatctaa
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