Vibrio parahaemolyticus UCM-V493: VPUCM_2054
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Entry
VPUCM_2054 CDS
T03116
Name
(GenBank) Cytochrome c-type protein NapC
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00680
Methane metabolism
vph01100
Metabolic pathways
vph01120
Microbial metabolism in diverse environments
vph02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
VPUCM_2054
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VPUCM_2054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_2054
Transporters [BR:
vph02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
VPUCM_2054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cytochrom_NNT
TorC_3rd
Mtrc-MtrF_II-IV_dom
Cytochrome_C7
Cytochrom_c3_2
Cytochrom_CIII
Paired_CXXCH_1
Cytochrom_c_NrfB-like
DHC
Cytochrome_CBB3
Motif
Other DBs
NCBI-ProteinID:
AHJ00013
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Position
1:complement(2216747..2217931)
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AA seq
394 aa
AA seq
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MKSLIIKLWRTMTRPAVHISLGVLTMGGFIAGVIFWGGFNTALEATNTEEFCISCHTMRD
NVYVELQDTVHWKNHSGVRATCPDCHVPHNWTDKIARKMQASKEVFAQVFGNYSEPGVFE
ERRIELAKHEWDRFSANKSLECKNCHNYESMDFEQMSPTARIQMKQAAEKDQSCVDCHKG
IAHNLPAGMDSIGGIVGDLEQMTSGTDYAVGQELVSIRHLPIYFDAQGAKEAGLLNPAST
VKVLEDKGDFIEIEIDGWRKAKGFGRVIQEDFGKNIATASLLKEASTDSNIVTTGEKRVD
ELTGLPWEKVAAKVWIKKESMLNDINPVWEKSKEAYKTNCSVCHTQPAEAHFDANTWPGM
FDGMLAFVNLDTDSEALILKYLQKHSSDYAEGHH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattaatcattaaactgtggcgtacgatgacgcgcccggcagttcatatcagc
cttggcgtgctgactatgggcggtttcatcgctggtgttattttctggggtggatttaac
accgcgctagaagcaaccaacactgaagaattctgtattagctgtcacaccatgcgtgac
aacgtatatgttgagctgcaagacacggttcactggaaaaaccactctggtgttcgtgct
acttgtcctgactgtcacgttcctcacaactggactgacaaaatcgctcgtaaaatgcag
gcttctaaagaagtatttgcgcaagtttttggcaactactctgaacctggcgttttcgaa
gagcgtcgtatcgaacttgctaaacacgaatgggatcgtttctctgcaaacaaatctcta
gagtgtaaaaactgtcacaactacgagtctatggacttcgagcaaatgtctccaaccgct
cgtatccagatgaagcaagcggcagaaaaagatcaaagctgtgttgactgtcacaaaggt
atcgcgcacaacctaccagcaggtatggatagcatcggcggcatcgtgggtgatctagag
caaatgacatcaggtactgactacgcagtaggtcaagagctcgtaagtattcgtcacctt
ccaatttactttgacgcgcaaggcgcgaaagaagcgggtcttctaaaccctgcatcaaca
gtaaaagttctggaagataaaggtgacttcatcgaaatcgaaattgacggctggcgtaaa
gcgaaaggctttggtcgcgtaattcaagaagatttcggtaagaacattgcaactgcgtct
ctacttaaagaagcgtctacagacagcaacatcgtaacgactggtgaaaaacgagtggac
gagctgactggtcttccttgggagaaagtggcagcgaaagtatggatcaagaaagagtct
atgctgaacgacatcaaccctgtatgggaaaaatcgaaagaagcatacaaaacaaactgt
tctgtatgtcatacacaaccagctgaagcgcacttcgatgcgaacacctggccaggtatg
ttcgacggcatgcttgcgttcgttaacctagatacagacagtgaagcactgatcttgaaa
tatctacagaagcactcttcagattatgctgaaggccaccactaa
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