Vibrio parahaemolyticus UCM-V493: VPUCM_2100
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Entry
VPUCM_2100 CDS
T03116
Name
(GenBank) Heat shock (predicted periplasmic) protein YciM, precursor
KO
K19804
lipopolysaccharide assembly protein B
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
VPUCM_2100
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_7
TPR_14
TPR_2
Zn_ribbon_LapB
TPR_8
TPR_12
TPR_1
TPR_16
TPR_20
ARM_TT21_5th
TPR_Slam
ARM_TT21_N
TPR_11
ANAPC3
ARM_TT21_C
TPR_CcmH_CycH
TPR_15
ARM_TT21_4th
ARM_TT21
SPG48
Zn_ribbon_15
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AHJ00059
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Position
1:complement(2263454..2264629)
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AA seq
391 aa
AA seq
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MLELLFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYMAGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTLDQKNLALQQLAKDYMVS
GFLDRAEKIFEQLVEEPDYKEAALQQLVTIYQQTREWEKAIHYANQLAKMGNQRSRMRTN
IAHFWCEIAMLDQADGNSNKAIQHFKKALSEDPKCVRASISLGRIYLESEDYKQTIKYLT
GVLEQDKDFVSDVLPTIAECYHHLGQEDELVEFLRACIDKKAGVSAELMLAQLVAHHESV
GAAQELLTKQLLKNPTMKGFYRLIDYHIAEAEDGRAKDSLSTLQAMVGEQLKVKPHYRCR
KCGFSTHSLYWHCPSCKGWGTIKPIRGLDGE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaactactcttcttgttgttgccgatagcggctgcgtatggctggtacatgggg
catcgcagcgctcagcaagacaagcagaagcaatctcatcaaatttcccgtcagtatatg
gcgggtctgaacttactgctctctgatcaatcagataaagccgtagaccactttattgaa
ttgctccaagttgacaacgaaacgattgatactcacttagcgctgggtaatcttttccgt
tctcgtggtgaagtcgaccgtgctattcgtatccaccaaaatctcatttctcgttctggt
ttgactctagatcagaaaaacctagccctgcagcagttagcgaaagactatatggtgtcg
ggctttttagaccgagctgaaaaaatcttcgaacaactagttgaagagcctgattacaaa
gaggcggcgctccaacagttagtcactatttaccagcaaacgcgtgaatgggaaaaagcg
attcattacgccaatcagctagctaaaatgggtaatcagcgtagtcgtatgcgtacaaat
attgcgcatttttggtgtgaaattgccatgctagaccaagctgatggcaattcgaataaa
gctatccagcatttcaaaaaagcactttccgaagatccaaaatgtgttcgagcaagtatt
tcgctcggccggatttacttggaatcagaagactacaaacaaaccattaagtatctaacg
ggtgtattggagcaagacaaagactttgtgagcgacgttttgccgacaattgctgagtgc
tatcaccatctcggacaagaagatgaactggtcgagtttttacgcgcctgcattgataaa
aaggcaggggtgtcagcggagttgatgctggctcagttagtcgctcaccatgaaagcgtc
ggtgctgcccaagaattgctgacgaaacagctactgaaaaatccaaccatgaagggcttt
tatcgcctgattgactaccacattgcagaggctgaagatggtcgcgcaaaagacagttta
tctacattacaagcgatggttggagaacaattaaaagtaaaaccgcactaccgatgcagg
aagtgtggcttctctactcattccctttattggcattgcccttcctgtaaagggtggggg
acgatcaagccaatccgcggattggatggggaatag
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