KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_2109
Entry
VPUCM_2109        CDS       T03116                                 
Name
(GenBank) Error-prone repair-like protein of DNA polymerase III alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:vph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vph03400]
    VPUCM_2109
Enzymes [BR:vph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VPUCM_2109
DNA repair and recombination proteins [BR:vph03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    VPUCM_2109
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger HHH_6 tRNA_anti-codon PHP tRNA_anti_2
Other DBs
NCBI-ProteinID: AHJ00068
LinkDB
Position
1:2272688..2275762
AA seq 1024 aa
MSYAELFCQSNFSFLTGASHAEELVLQAAFYRYHAIAITDECSVAGVVKAHATIEQHKLD
IKQIVGSMFWLNEECQIVLLCPCRKAYAEMCRIITNARRRSEKGSYQLSEWDLMSIRHCL
VLWLPTHQASDHYWGRWLNQHHNNRLWVAIQRHLGGDDDAYTNHCEKLAHELQLPITACG
GVLMHTAERLPLQHILTAIKHGCSVDKLGFERLSNAERALRPLNKLVRIYKPEWLEESKY
IADLCEFKLSDLKYEYPTELIPNGYTPNSYLRMLVEQGKERRFPEGVPEDINQTIENELR
LIEDLKYHYYFLTIHDIVMFAKQQGILYQGRGSAANSVVCYCLEITAVDPRQISVLFERF
ISKERKEPPDIDVDFEHERREEVIQYIYKKYGRERAALAATVISYRFKSAVREVGKALGI
EETQLDFFIKNVNRRDRSQGWQAQIIELGLQPESLKGQQFIQLVNEIIGFPRHLSQHVGG
FVISSGPLYELVPVENAAMEDRTIIQWDKDDLESLELLKVDVLALGMLNAIRKCFQLIEK
HHQRSLSIAEITRRQDDPHVYRMLQKADTVGVFQIESRAQMSMLPRLKPACYYDLVIQIA
IVRPGPIQGDMVHPFLKRRNGEEPVSYPSEAVKSVLERTMGVPIFQEQVIKLAMVAAGFS
GGEADQLRRAMASWKKNGDLAKFKPKLLNGMQERGYDLAFAERIFEQICGFGEYGFPESH
SASFAVLAYCSAWLKYYYPAEFYTALLNSQPMGFYSPSQLVQDARRHGVEVLPICVNHSY
YQHHLIQRPNGRLGVQLGFRLVKGFNEEGATRLVERRSKTGYHSIQEVKQILRSRRDIEL
LASANAFQILSGNRYNARWAAMDSLSDLPLFHHIEEPSVRYQAQPSEYESLIEDYASTDL
SLNRHPITLLEEAGILPRFTRMKQLVDKEHKSLVTVAGVVTGRQSPGTAAGVTFFTLEDD
TGNINVVVWSATARAQKQAYLTSKILMVKGILEREGEVIHVIAGKLIDCTHYLSNLQSKS
RDFH
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgagttacgcagaattattttgtcagtctaatttctctttcctcactggcgcttctcat
gcagaagagcttgtgttgcaagcggctttttatcgctaccatgccatcgcgattactgat
gagtgctcggtcgctggcgtggtcaaagcccatgcaacgattgagcagcataaacttgat
atcaaacagatcgtcggtagtatgttctggctcaacgaagagtgccaaatagtcctactt
tgcccctgccgtaaagcttatgctgagatgtgccgtatcatcactaacgcgagacgacgc
agcgaaaaaggcagctatcagctttctgagtgggatctgatgtcgattcgtcactgctta
gtattgtggcttcctacccatcaagcgagtgaccattactgggggcgctggctcaatcaa
caccataacaatcgactatgggttgcgattcaacgtcatcttggtggcgacgatgatgcc
tacacaaatcactgcgagaagctagctcacgaattgcaactgcctattacagcttgtggc
ggcgtactcatgcacacggctgagcgcctacctttacaacatatactcaccgccattaag
catggttgcagtgttgataagctgggctttgaacgtctttctaatgctgaacgcgcatta
cgaccactgaataagttggttcgtatctacaaaccagagtggctagaggaaagtaagtac
atcgcggatttgtgcgaattcaaattgtctgatctgaaatacgaataccctacagaactg
attcctaatggctatacaccaaattcttacttacgaatgttggtggaacaaggtaaagag
cgtcgctttcctgaaggcgtgccggaggacatcaaccaaaccatcgaaaacgaactgagg
ttgatagaagacctcaagtaccattattactttttaaccattcatgacatcgtcatgttt
gctaaacagcaaggcattctttatcaaggccgaggatcagcggcgaattccgtcgtgtgt
tactgcttagaaatcaccgccgtcgatccaagacaaatctccgtcttgttcgaacgattt
atcagtaaggaacgcaaagagccaccagatatcgacgttgacttcgaacacgagcgccgt
gaagaagtcattcaatacatttataaaaaatacggacgtgaacgtgccgctcttgccgca
acagtgatcagttatcgcttcaaaagtgcggtacgtgaggtcggaaaagcgttaggtatt
gaagagacccaattggattttttcatcaaaaatgttaaccgccgagaccgtagccaaggt
tggcaagcacaaattattgagcttggtttgcaaccagaatcgctaaaaggtcagcagttt
atccaactggtgaatgagatcattggttttcctcgtcatctttctcagcatgtcggcggc
ttcgtgatttcatctggtccattatatgaattggtgcccgttgaaaatgcagcaatggaa
gatcgaactatcattcaatgggataaggacgatctcgaaagcttagagcttctgaaagtc
gatgtattggcgctcgggatgctcaatgctatccgtaaatgctttcaattaattgagaaa
caccatcagcgatcactttcaattgctgagatcactcgccgacaagatgatcctcatgta
tatcgcatgctccaaaaagcagacaccgttggcgtttttcaaatcgaatctcgcgcgcaa
atgagcatgctgcctcgcttaaaaccagcttgttattacgacttagttattcaaatcgcg
atcgtacgcccagggccgattcaaggcgacatggttcacccgtttttgaaaaggcgcaac
ggcgaagagcctgtcagctatccatcagaagcagtgaaaagcgttttagaaagaaccatg
ggcgtgcctatattccaagaacaagtcatcaaacttgccatggtcgctgcggggtttagt
ggtggcgaggccgatcaacttcgtcgagccatggcttcatggaaaaagaatggtgattta
gccaagtttaagcctaagctgctcaatggcatgcaagagcgaggttacgacttagcattt
gcggagcgcatttttgaacaaatttgtggctttggtgaatacggatttccagaaagtcat
tcagcgtctttcgccgttttggcgtattgctcggcatggctaaaatactactatcccgca
gagttttatacggcactgttaaacagccagccaatggggttttacagcccttctcaattg
gtgcaagacgctcgtcgtcacggcgtcgaagttctgcctatctgtgtcaatcattcctat
taccagcatcatttgattcaacgccccaatggccgacttggtgtgcaactgggctttcga
ttggttaaaggctttaatgaggaaggcgcgactcgcttagtcgaacgacgatcaaaaacg
ggctatcactcaatacaagaggtcaaacaaatcttgagaagtcgtcgtgatatcgaatta
ttagcttctgcaaatgcctttcagatcttatcgggtaaccgttataacgcacgttgggca
gcaatggattcactgtctgatttgcctttgtttcatcatatcgaagagccaagcgttaga
tatcaagcacagccatctgaatatgaaagccttattgaagactatgccagtacagatctt
tcgctgaatcgacacccaattactctgctagaagaagcgggaatacttcctcgctttacg
cgtatgaagcaattggttgataaagagcataaatcgcttgtgactgtggcaggtgtcgtc
accggaaggcagtccccaggcactgcagcaggcgttacatttttcaccttagaagatgac
actggcaacattaacgttgtggtatggagcgcgacggcaagagcgcaaaagcaagcttac
ctcacctcaaaaatattgatggtaaaaggtattttggaacgagagggagaagtcatccac
gtcattgcgggtaaattgattgactgtactcattacttatccaacttgcagagtaagtct
cgtgactttcattaa

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