KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_21302
Entry
VPUCM_21302       CDS       T03116                                 
Name
(GenBank) hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:vph00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    VPUCM_21302
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vph01002]
    VPUCM_21302
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vph01011]
    VPUCM_21302
Peptidases and inhibitors [BR:vph01002]
 Cysteine peptidases
  Family C82
   VPUCM_21302
Peptidoglycan biosynthesis and degradation proteins [BR:vph01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   VPUCM_21302
SSDB
Motif
Pfam: YkuD Ldt_C LysM
Other DBs
NCBI-ProteinID: AHJ02423
LinkDB
Position
2:complement(1408847..1409773)
AA seq 308 aa
MLSKKRSMSFAKRTLLSVSLSLVSGLSFAKMYELPEDGSRLIGRLENHVVQEGETMANIA
KHYDVGMLALMAANKGVDPFLPQEGRVLTIPSQLILPEVPHQGIVINLAELRLYYFPEGE
DVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASIRAEYRAKGVDLPAVVPAGPDN
PLGLFALRLAYGNGEYLIHGTNKDFGIGMRVSAGCIRMDPSDIEWLFDKVRRGEKVNIIN
QPVKVSLEPDRSVFVEAHEPLTRSNGEKDHLQVPKELGWWLNEFGLTNVKAKAVIAAQNG
VPVEITAP
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcttagcaaaaagcgatcaatgagttttgcaaaacgaaccctgttatctgtctcgtta
tcattagtgagtggattgtcattcgccaaaatgtacgagttaccagaggacggcagccgt
ttgattggtcgcctcgaaaaccacgtcgtgcaagaaggcgagaccatggcaaacatcgcc
aagcattacgacgtgggtatgctagcgttgatggcagcgaacaaaggcgttgatccattt
cttcctcaagaagggcgcgtgcttactattccatctcaacttattcttcctgaagttcct
caccaaggcatcgtgattaacttggcagagctgcgtttgtactacttcccagagggcgaa
gatgtggtgcatgttttccctgttggtattggccgaattggtcgagatacaccagtgatg
acaaccagcatcagccaaaaacgtccgaacccaacatggacgccacctgcgtctattcgt
gccgagtacagagcgaaaggggtggatttacctgcggttgtgccagcaggccccgacaac
ccgcttgggttgtttgcacttcgtctagcttacggaaatggtgagtaccttattcacggt
accaacaaagatttcggcatcggaatgcgcgtgagtgctggttgcattcgtatggaccca
agtgatatcgaatggttgttcgacaaagttcgtcgtggtgaaaaagtaaacatcatcaat
cagccagtgaaagtgtcactagagccggatcgtagtgtgtttgtggaagcgcatgaaccg
ttaactcgcagcaatggcgagaaagatcatttacaagttccgaaagaattgggctggtgg
ctaaatgaatttggattgacgaatgtaaaagcgaaagctgttatcgccgctcagaatggg
gttccagtagaaataaccgcgccttaa

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