Vibrio parahaemolyticus UCM-V493: VPUCM_21302
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Entry
VPUCM_21302 CDS
T03116
Name
(GenBank) hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VPUCM_21302
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vph01002
]
VPUCM_21302
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
VPUCM_21302
Peptidases and inhibitors [BR:
vph01002
]
Cysteine peptidases
Family C82
VPUCM_21302
Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VPUCM_21302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AHJ02423
LinkDB
All DBs
Position
2:complement(1408847..1409773)
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AA seq
308 aa
AA seq
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MLSKKRSMSFAKRTLLSVSLSLVSGLSFAKMYELPEDGSRLIGRLENHVVQEGETMANIA
KHYDVGMLALMAANKGVDPFLPQEGRVLTIPSQLILPEVPHQGIVINLAELRLYYFPEGE
DVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASIRAEYRAKGVDLPAVVPAGPDN
PLGLFALRLAYGNGEYLIHGTNKDFGIGMRVSAGCIRMDPSDIEWLFDKVRRGEKVNIIN
QPVKVSLEPDRSVFVEAHEPLTRSNGEKDHLQVPKELGWWLNEFGLTNVKAKAVIAAQNG
VPVEITAP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcaaaaagcgatcaatgagttttgcaaaacgaaccctgttatctgtctcgtta
tcattagtgagtggattgtcattcgccaaaatgtacgagttaccagaggacggcagccgt
ttgattggtcgcctcgaaaaccacgtcgtgcaagaaggcgagaccatggcaaacatcgcc
aagcattacgacgtgggtatgctagcgttgatggcagcgaacaaaggcgttgatccattt
cttcctcaagaagggcgcgtgcttactattccatctcaacttattcttcctgaagttcct
caccaaggcatcgtgattaacttggcagagctgcgtttgtactacttcccagagggcgaa
gatgtggtgcatgttttccctgttggtattggccgaattggtcgagatacaccagtgatg
acaaccagcatcagccaaaaacgtccgaacccaacatggacgccacctgcgtctattcgt
gccgagtacagagcgaaaggggtggatttacctgcggttgtgccagcaggccccgacaac
ccgcttgggttgtttgcacttcgtctagcttacggaaatggtgagtaccttattcacggt
accaacaaagatttcggcatcggaatgcgcgtgagtgctggttgcattcgtatggaccca
agtgatatcgaatggttgttcgacaaagttcgtcgtggtgaaaaagtaaacatcatcaat
cagccagtgaaagtgtcactagagccggatcgtagtgtgtttgtggaagcgcatgaaccg
ttaactcgcagcaatggcgagaaagatcatttacaagttccgaaagaattgggctggtgg
ctaaatgaatttggattgacgaatgtaaaagcgaaagctgttatcgccgctcagaatggg
gttccagtagaaataaccgcgccttaa
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