KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_21383
Entry
VPUCM_21383       CDS       T03116                                 
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph02020  Two-component system
vph02040  Flagellar assembly
vph05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vph00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VPUCM_21383
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VPUCM_21383
  09142 Cell motility
   02040 Flagellar assembly
    VPUCM_21383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vph03021]
    VPUCM_21383
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vph02035]
    VPUCM_21383
Transcription machinery [BR:vph03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     VPUCM_21383
Bacterial motility proteins [BR:vph02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    VPUCM_21383
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 EIAV_Rev
Other DBs
NCBI-ProteinID: AHJ02504
LinkDB
Position
2:1495783..1496511
AA seq 242 aa
MLDMNPQETYTAPEEVNSSSHQIDENALLQRHQVMVKRVVNQLRIHATSHCSIEDMQQIG
LIALVEAGRRYGDIDDPHFPAFAVCRIRGAVLDELRRLDWRSRKTRQQAHELNDVTRDLT
RSLGRMPTDSEIIKALGTDEQDYYNRQNATLAGEMQSLDQLMENSTDSHFGGQYDGMEHE
HIRRSLDSALGRLSKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQLNQLM
SS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttagacatgaaccctcaagaaacgtacaccgcaccagaggaagtgaactcctcctca
caccagattgatgaaaacgcacttttgcaacgtcaccaagtgatggtgaaacgcgtggtt
aaccagctccgtattcatgctacttcccactgcagtatcgaagatatgcaacaaattggt
cttatcgcgctggttgaagcggggcgccgttacggagacattgacgaccctcacttccca
gcgtttgcggtttgtcgtattcgcggcgcggtcttagatgagctgcgccgtttagactgg
cgctcacgtaagacacgtcagcaagcccatgagcttaacgacgtcacgcgagatctcacc
cgctcgttaggccgcatgccaacggactctgaaatcatcaaggctcttggcaccgacgag
caagattactacaaccgtcaaaacgcaactctcgcaggtgaaatgcaaagtctcgatcaa
ctcatggagaacagcaccgacagccactttggtggtcagtacgacggcatggagcacgag
cacattcgtcgtagcttagacagtgcactaggtcgattgtcaaagcgagatcaactgcta
ctgacactgttttatcaacacgaactcaatttacacgaaatagctctcgttttggatctg
acaccacctcgaatttgtcagcttcataaacaagcgctgaaacaactcaaccaattaatg
tcctcttag

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