Vibrio parahaemolyticus UCM-V493: VPUCM_21418
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Entry
VPUCM_21418 CDS
T03116
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00550
Peptidoglycan biosynthesis
vph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VPUCM_21418
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vph01002
]
VPUCM_21418
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
VPUCM_21418
Enzymes [BR:
vph01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VPUCM_21418
Peptidases and inhibitors [BR:
vph01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
VPUCM_21418
Peptidoglycan biosynthesis and degradation proteins [BR:
vph01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
VPUCM_21418
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
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Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AHJ02539
LinkDB
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Position
2:complement(1527269..1528426)
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AA seq
385 aa
AA seq
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MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL
TKLMTAYVVGQEIKAGRLKWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII
QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL
MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA
KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGEVESKVRVWKGNANQV
EAIFAKDAYLTLPRSMTAGLDKSVVLNEPLIAPIAQGDEIGKVVWKSDDSTVASYPLVSS
QAVEEGSWFGQLWDSLVLWVKSFFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtcactggctcgatggacaattgtgacttgtttaataagcgtacctactttt
gccgttgttacgcccaacccacctcagttacaggcaaaaggctacgtattaatggacttt
caatccggtgccattattgccgagcataacgggcgagcaggccttgctccggcgagttta
accaagttgatgaccgcttatgtagttggacaagaaatcaaagcggggcgtttgaaatgg
gatgatgttgtcaccgtgagcgaaaacgcgtggtcggccaagtttcccggttcttctaaa
atgttcatcaaaccgaaagatgaaattagtgttgcgaacttaatgcgcggcgtgatcatc
caatcaggaaatgatgcgtgcgttgcactggctgagcatgttgcaggcagtgaacgcggc
tttgtcgccttgatgaatggttgggcggagaaattaggactgcaagacacctattttgtg
aactcccatggtcttgatagtgatggcatccaaacctcaccaaccgatatggcaaaactc
atgcagtcgatcatcagcgatgttcctgatgtgtatgcgctatacagcgagaaagtcttc
aagtggaacgacattacacagtacaaccgcaataaattgctgtgggacaattccattgat
gtcgacgggggaaaaaccggctacaccagcaatgcgggatacagcttagtgagctcggcc
aaagaaggaagaatgcgccttatttcggtggtgatgggcacgccgagtaaacaggctcgg
atcagccaatcgaagaatctactcagctatggttttcgcttttatgacaccaagcaagtt
gctaaacagggagaagttgagtctaaagttcgcgtttggaagggaaatgctaatcaagtt
gaagcgatcttcgctaaagatgcctatctcactctgcctcgttcaatgacggctgggctt
gataagagtgtggtgctaaatgaaccgttgattgcgccgatcgcgcaaggagatgagatt
ggtaaggtcgtttggaaaagcgatgacagtaccgtggcgagttatcccttggtcagcagc
caagcggtagaagagggctcgtggttcggtcagctttgggacagtctggtgctgtgggtg
aaatcgttctttaactag
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