Vibrio parahaemolyticus UCM-V493: VPUCM_21457
Help
Entry
VPUCM_21457 CDS
T03116
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00330
Arginine and proline metabolism
vph00480
Glutathione metabolism
vph01100
Metabolic pathways
vph01110
Biosynthesis of secondary metabolites
vph04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VPUCM_21457
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VPUCM_21457
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VPUCM_21457
Enzymes [BR:
vph01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VPUCM_21457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AHJ02578
LinkDB
All DBs
Position
2:complement(1574286..1576433)
Genome browser
AA seq
715 aa
AA seq
DB search
MPEDFSLLAESLDEQFNRHLQPLEQVELTDVGAAIITSADIKAGLHKMISETGYGIPVFL
VTDENPVSAEDYVWLTGVIDLERQSIEYYCRQINEAVTKYECRLLPPFFKQLTHYVEMGN
SAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIHEGSAHQAQAHA
AKVFNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSNHHGALIQAGGMPVYLE
TARNPWGFIGGMDEHCFDEEYIRAQIAKVDPERARDERPFRLAIIQLGTYDGTIYNARYV
MDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQSVHKQQAGFSQT
SQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAKIHDGEAGLRLWRD
AVKTGIEARKEILKSCELIRPFIPDEVEGQPWGSYDTDVIATNKKFFMFEPNASWHKFEG
YGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEKCDLNSILFLLT
PAEDMGKIRHLVAQINRFEKFIRDDAPLSIVLPSVYEANKERYRGYTIRQLCQEMHDMYK
ELNVKQLQKAMFRSEYFPQMVHKPDVATRKYFRGECDYLPLKEAVGRVAAEGALPYPPGI
ICVITGEIWTPHVVDYFLSLEEGINRFPGFAPEIQGVYLEDVNGRTTAHCYVLKD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagacttcagtttattagctgaatctttagatgaacaatttaatcgtcattta
caacctttagagcaagttgaattaaccgacgttggtgcggctattattacttcagcagac
attaaagctggtctgcataaaatgatttctgaaacgggttacggtattccagttttctta
gtaacggatgaaaacccagtttcggcagaagattacgtttggctaactggcgttatcgat
ttagaaagacaatctattgagtactactgtcgtcaaatcaatgaagcagtaaccaagtac
gaatgtcgtctgcttcctcctttcttcaagcaattaacgcactatgttgagatgggtaac
tcagcgtttgactgtccgggacaccaaggtggtcagttcttcaaaaaacacccagctggt
aaacaattctacgatttcttcggcgaaaacctgttccgtagtgacttgtgtaacgcggac
gtggatttaggtgacttgctgatccacgaaggttctgcacaccaagcgcaagcgcacgct
gcaaaagtatttaacgcggacaaaacttacttcgtactcaacggtacttctgcttcaaac
aaagtggtgtgtaacgcgctagtaactgaaggtgatttggtactgttcgaccgtaacaac
cacaaatcgaaccaccacggtgcgttaatccaagcgggtggtatgccagtttacttagaa
acggcgcgtaacccttggggcttcatcggtggtatggatgagcactgtttcgatgaagaa
tacattcgtgctcaaatcgcgaaagtggatccagaacgtgcacgcgatgaacgtcctttc
cgtcttgctattatccagcttggtacttacgacggtactatctacaacgctcgttacgtg
atggataagatcggtcatctttgtgactacatcctgtttgactctgcgtgggttggttat
gagcagttcatccctatgatgaaagactgttcaccactgctgctggatttgaaaccagaa
gacgcaggtgtgatcgtgactcagtctgttcacaaacaacaagctggcttctctcaaaca
tcgcaaatccacaaaaaagaccgccatatcaaaggtcaagctcgttactgtaaccataaa
cgctttaacaacgcgtttatgatgcacgcatcgacttcaccattctacgcactgttctct
gcgcttgatgtgaacgcgaagatccacgatggcgaagcaggtctgcgtttatggcgcgat
gcggttaagactggtatcgaagcgcgtaaagaaatccttaagagttgtgaattgattcgt
ccgttcattccagacgaagtcgaaggtcaaccttggggcagctacgacactgacgtgatc
gccacgaacaagaaattcttcatgtttgagccaaacgcaagctggcacaaatttgaaggt
tacggtgaaggtcaatacttcgttgacccatgtaaattgttgctaactactgcgggtatt
gcagaagacggcagctacgcagatttcggtattcctgcaacgctattggcgaacttcctt
cgtgaaaacggcatcatccctgagaagtgtgacttgaactctatcttgttcctactcact
cctgcggaagatatgggtaagatccgtcaccttgtggctcaaattaaccgattcgaaaaa
ttcatccgtgatgatgcgcctctaagtatcgtacttccaagcgtctacgaagcgaataaa
gaacgctaccgtggctacaccatccgtcagctatgtcaggaaatgcatgacatgtacaaa
gagctgaacgtgaaacagctacaaaaagcgatgttccgcagcgagtacttcccacaaatg
gttcacaaaccagacgtggcaacacgcaaatacttccgtggtgaatgcgattacctacca
cttaaagaggccgtaggtcgcgtagccgctgagggtgcacttccttaccctccaggcatc
atctgtgtgatcactggtgaaatctggaccccacacgtggtggattacttcctatctcta
gaagaaggcatcaaccgcttcccaggcttcgcgccagaaattcaaggtgtgtaccttgaa
gatgttaacggtcgcactaccgcacattgttatgtcctaaaagattaa
DBGET
integrated database retrieval system
