Vibrio parahaemolyticus UCM-V493: VPUCM_2148
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Entry
VPUCM_2148 CDS
T03116
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2148
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
VPUCM_2148
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
AHJ00107
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All DBs
Position
1:2318272..2319240
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AA seq
322 aa
AA seq
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MRVVLGPMEGVLDHLMRQILTEINDYDLCVTEFVRVIDQVLPDHVFHRLCPELMQGSQTT
SGVPVHVQLLGQEPHWMAENAIRAAELGARGIDLNFGCPAKMVNKSKGGAALLQHPELIH
SVVKACRDAVPANIPVSAKIRLGWENPEDCFEIVDAIQSAGANELTVHARTKQGGYKASE
IKWEYINKIRERFSIPLIANGEIWNFEDGQRCIETTGVDSLMVCRGAFNIPNLGNMVKHN
HTPMVWSDVVDLLIYYSKFEMKGDKGLYYPNRVKQWFAYLRQSYPEANELFREIRTFNKA
APIVEHIQRYRDELQSRQSQVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttgtattaggcccaatggaaggcgttttagaccatttgatgcgccaaatcctg
accgaaataaacgactatgatctgtgtgtgacggagttcgttcgagtgatcgatcaagtc
ctgccagaccatgtctttcatcgcttatgtccggagcttatgcaaggctctcagaccact
tctggtgtgcctgtacatgttcaactactaggccaagagcctcactggatggcggaaaac
gcaatccgagcagcagagcttggcgcgcgcggcatcgacctaaattttggttgcccagca
aaaatggtcaacaaaagcaaaggaggagcggcgctattgcagcatcctgagttgattcat
agcgtggtaaaagcatgccgcgacgcagtgcctgcgaatatccctgtctccgcaaaaatt
cgtctgggctgggaaaaccctgaagactgttttgaaatcgtggatgcgattcaatctgcg
ggagcgaatgaactgaccgttcacgcacgtactaagcaaggcggttataaagcatctgaa
atcaagtgggaatacatcaataaaattcgcgagcgattctccatacctttgattgccaat
ggtgaaatctggaatttcgaagatggtcaacgctgcattgaaaccactggtgtcgactct
ctgatggtgtgccgcggtgcgttcaacattcctaacctgggtaacatggtaaaacacaac
cacacgccaatggtttggtctgatgtggtcgacctgctgatctactactcaaagtttgaa
atgaagggtgataaaggtttgtactatccaaaccgcgtgaagcaatggttcgcttacctg
cgccaatcttacccagaagctaacgaattattccgcgaaatccgaacattcaataaagca
gcaccgattgttgagcacatccagcgctaccgcgatgaactccaatcgcgtcaaagccaa
gtggcttaa
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