Vibrio parahaemolyticus UCM-V493: VPUCM_21520
Help
Entry
VPUCM_21520 CDS
T03116
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPUCM_21520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_21520
Transporters [BR:
vph02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VPUCM_21520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_21
AAA_24
AAA_16
Septin
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AHJ02641
LinkDB
All DBs
Position
2:1654324..1656174
Genome browser
AA seq
616 aa
AA seq
DB search
MFKRFEGFTEPFPKSTPDQPPSGIFAFLRHYTRGYEKPLIIMSLMSTIVAIVEVMLFGAM
GQLVDWLSTSNPETFLQDNRADLIFYGVLLLVVMPLLVVIYSLLVHQTLLGNYPMSIRWL
AHRYLLNQSLNFYQDDFAGRVATKVMQTSLAVRETVMKSMDVFVYVTVYFTSMVVMLAAA
DWRLMIPMIVWLLVYIAIQIYFVPKLKDVASEQADARSTMTGRIVDSYTNIQTVKLFSHS
QRETQYAEQGMKGFLNTVYRQMRLVTGFDVAVEISNYILVFSVAALSIYLWLDSAISVGA
IAIAVSLALRVNGMSMWIMWEVGALFENMGTVVDGMKTLSKPIDIQDKPNAKDLVVSQGG
IQFDNVSFHYGENKGVINHLNLDIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVEEGSIKI
DGQNIADVTQDSLRSKIGMVTQDTSLLHRSIRDNILYGNPTASEEELLKATKQAHAHEFI
ETLTDPFGNVGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA
IQESLNELMQGKTVIAIAHRLSTIAQMDRLIVLDKGNVVEQGTHQELIAHNGIYAQLWAH
QTGGFLGEELDNQQAS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgatttgaaggcttcacagagccgtttcccaaatctacgcccgatcagccc
ccttcagggatttttgcctttctacgccattacacccgagggtatgaaaagccactgatc
atcatgtcactgatgtcgacgattgttgccatcgtcgaagtcatgctatttggtgcaatg
ggccaactggtggactggctttccaccagcaatccagaaacctttttgcaagataaccga
gcggatctgattttttacggcgtcttacttctggttgtaatgccacttttggttgttatc
tactctttgctggtgcatcaaaccttgttgggtaactacccaatgtccattcgctggctt
gctcaccgttatctgctcaatcagagtctgaacttctatcaagatgattttgcagggcgc
gttgcaaccaaagtgatgcaaacctctctcgcagtacgtgaaacggtcatgaagagcatg
gacgtatttgtctacgtgacggtttacttcaccagtatggtcgtgatgttagcagctgca
gattggcgtttaatgattccgatgattgtctggcttttggtttacatcgcgattcagatt
tactttgtaccgaaactgaaagatgtggcctctgagcaagccgatgcgcgctcaaccatg
acaggccgtattgtcgacagctacaccaacatccaaaccgtgaagctgttttcacatagc
cagcgagaaacccaatatgccgaacaaggcatgaaaggatttctcaacacggtttatcgt
caaatgcgcttggttacgggctttgacgtggcggttgaaatttccaactacatcttggtg
ttttccgtcgcggctttgtcgatttatctgtggttggacagcgcgattagcgtcggtgcc
attgctattgcggtcagcctagcgctgcgcgttaacggcatgtcgatgtggatcatgtgg
gaagtaggagccctgtttgaaaacatgggtactgtcgtggatggcatgaaaacactgtcc
aaacctatcgatatccaagacaaaccgaatgcgaaagacttggtcgtatctcaaggtggc
atccagttcgataacgtcagctttcattacggtgaaaacaaaggcgtcatcaaccatctg
aatctcgacatcaaacctggcgaaaaagtcggcttggttgggcgctctggcgcaggcaaa
tccacgttggtgaacttgctgttacgcttccatgatgtggaagaaggcagcattaagatt
gacggtcaaaacattgctgacgtcacgcaagattcgttgcgctcgaaaattggtatggtg
acacaggatacgtctcttttgcaccgttcaataagagataacatcttgtacggcaaccca
accgcctcagaagaggaactgcttaaagcgacgaaacaagcgcacgctcacgagttcatc
gaaacactgacagacccatttggcaatgtcggctacgatgcgcaagttggcgaacgaggc
gtgaagttgtctggtggtcagcgtcagcgtatcgctatttctcgtgtgttattgaaagac
gcgccgctgttggtactggatgaagcgacttcagctctggactcagaagtcgaagcggct
atccaagaaagcttgaacgagctcatgcaaggcaaaaccgtgattgcaatagcacaccga
ttgtcgaccatcgcccagatggatcgcttaatcgttctcgacaaaggtaacgtcgtagag
caaggtacgcaccaagagctgatcgctcataacggcatctacgcacagctttgggcacac
caaactggcggttttcttggtgaagaactagacaatcagcaagcttcttaa
DBGET
integrated database retrieval system
