Vibrio parahaemolyticus UCM-V493: VPUCM_2160
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Entry
VPUCM_2160 CDS
T03116
Name
(GenBank) Holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VPUCM_2160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vph03400
]
VPUCM_2160
DNA repair and recombination proteins [BR:
vph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VPUCM_2160
RecFOR pathway proteins
VPUCM_2160
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
RecR_HhH
HHH
IMS_HHH
Transposase_20
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AHJ00119
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Position
1:complement(2329471..2330142)
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AA seq
223 aa
AA seq
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MSIQFFIILSQIHFQRVFIVIGRLRGILLEKQPPEVLIEVNGIGYEVQMPMSCFYELPNI
GEEAIIYTHFVVREDAQLLYGFNTVKERALFREVIKANGVGPKLGLGILSGMTASQFVSC
VEREDVSTLVKLPGVGKKTAERLVVEMKDRLKGWGAGDLFTPFTDAAPTDSASASSNSAE
EEAVSALLALGYKPTQASKVVSQIAKPDMSSEQLIREALKSMV
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtctatccagttctttattatcctgtcgcaaattcatttccaaagagtatttatagtg
attggacgtcttcgcggcattttgcttgaaaagcaaccacctgaagttttaattgaagtt
aacggcattggctatgaagttcagatgccaatgagctgtttctacgaactgccaaatatc
ggcgaagaagcgattatttatactcattttgttgtgcgtgaagatgcgcaattgctttac
ggttttaatacagtaaaagagcgtgcgctattccgtgaagtgatcaaagcaaacggcgtt
ggccctaaacttggcttaggtattctttcaggcatgacagcgagccagttcgtgtcttgt
gtagagcgtgaagatgtttctacgcttgtgaagttacctggtgttggtaagaaaaccgcc
gagcgtttggtcgttgaaatgaaagaccgcttaaaaggttggggggctggtgacttattc
acgccgtttactgatgccgctcctactgactcggcttccgcttcgtcaaatagtgcagaa
gaagaggcggtcagcgcacttcttgctctaggctacaagccaactcaagcgtcgaaagtc
gtttctcaaattgctaaaccggacatgagcagcgagcagctgatccgtgaagcactaaaa
tcaatggtgtaa
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