Vibrio parahaemolyticus UCM-V493: VPUCM_2271
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Entry
VPUCM_2271 CDS
T03116
Name
(GenBank) Cyn operon transcriptional activator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPUCM_2271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_2271
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VPUCM_2271
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AHJ00230
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Position
1:2448586..2449461
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNDFMKKYPDI
NIELTTENNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASQDYLAANPAPNHA
EELSNHSLLKGYPLIKWTLINSKGESVVNVERGRFQANALNVVRSACSEGLGITLMPDVM
IKEYIESGELLRVLPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttgaacctgtttcgactggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgatcccggtggcaaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgactattgaaccgtcacgcacgtaagctttctctgactgaagcc
ggagaacgcttttaccatgaatgctctcccctacttcaaaggctgacatcaaccgcggaa
gaaatcactgatgactgccgcggtgcatcaggcaaaattaaaatttctgcgccttacaat
ctgaccaagcgcatgatgatgccgatgtttaatgacttcatgaagaagtatccggatatc
aatatcgagctgacgacagagaacaacgctgatcaattagacccaacggaatgggatgtt
attttccgtgttggtccgcaacgagattccagcctaattgctcgtaaaattggcgaagta
aaagatattttggttgccagccaagactatctagcagccaaccctgcgccaaaccacgca
gaagagctctcaaaccactctttgctaaaaggctacccacttatcaagtggacactgatc
aacagcaaaggtgagtctgtggtgaacgtagagcgtggtcgtttccaagccaacgcactc
aatgttgttcgcagtgcttgttcagaaggtctaggtattacattaatgcctgatgtgatg
attaaggaatacatcgaaagtggtgaattgttgcgagtcttgccagattggagcgcaaac
ccgcgcgacatctacatgctgtacaaccacaaagatcacttgccagagaaagtgcgtctg
ttcatcgactttgtgattgcctacaacattcactaa
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