Vibrio parahaemolyticus UCM-V493: VPUCM_2395
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Entry
VPUCM_2395 CDS
T03116
Name
(GenBank) N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
KO
K02565
N-acetylglucosamine repressor
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_2395
Transcription factors [BR:
vph03000
]
Prokaryotic type
Other transcription factors
Others
VPUCM_2395
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Ortholog
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GFIT
Motif
Pfam:
ROK
MarR
HTH_24
Fe_dep_repress
SMC_ScpB
HTH_Crp_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AHJ00354
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Position
1:2575174..2576388
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AA seq
404 aa
AA seq
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MNGGQIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIK
EVAQQASTGGRRAISLTTEVKPFHSIAVRLGRDYVQFCLYDLGGTALAEDQHELHYTNQA
DLIAGLIDLLKDFVSRCQDKIDQLIAIGITLPGLVNPTTGVVEYMPNTDIDNLALGEIIR
EKFNTACFVGNDVRGMALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGFNRNVG
EIGHIQIDPLGEQCQCGNFGCLETVAANPAIIQRVKQLIAQGYESSLTQLEHITIEDVCT
HAMNGDELAKQSLVRVGNQLGKAIAITINLFNPQKIVIAGDITAAQDIVFPAIQRNVENQ
SLKTFHNDLPIVASHIDKQPTMGAFAMIKRAMLNGVLLQKLLED
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggacagattggtaatgtagatttagtaaaacagcttaacagcgctgcggta
tacaggctgattgatcagcaaggtcctatctcccgaattcaagtcgcggatgttagccag
ctcgctccagcgagtgttaccaagatcacccgtcaactattggaacgcggcctcattaaa
gaggtcgcccaacaagcttcaacaggtggtcgtcgagcaatctcattgaccactgaagtg
aagccttttcactctatcgccgttcgtttgggtcgagactacgttcaattctgtctctat
gacttaggcggcactgcactggcagaagatcaacacgaacttcactacaccaaccaagcc
gatttgatcgcaggtcttattgatttattaaaagacttcgtaagtcgttgccaagataaa
attgaccagttgattgctatcggtattacgttaccaggcctagttaaccctacgacaggc
gtcgttgagtacatgccaaatacggatattgataaccttgcgcttggtgaaattatccga
gagaagttcaatacggcttgttttgtcggtaacgacgtccgtggtatggcacttgcagaa
cattattttggtgctagccaagattgccaagactctatcttagtcagtgtacaccgcggt
actggcgcaggcatcattgttaacggccaagtgtttctgggttttaaccgtaacgtaggt
gaaatcggtcacattcaaattgaccctcttggtgagcaatgccaatgcggcaactttggt
tgtcttgaaacggttgcagctaacccagcgatcatccaacgcgttaaacagctcatagca
caaggctatgagtctagcttaacgcaattggagcacattacgattgaagatgtatgcact
catgctatgaacggtgatgagctcgcgaaacaaagcttagtacgtgtagggaaccagttg
ggtaaagccatcgctatcaccatcaacttgtttaacccacaaaaaatcgtgattgcaggt
gacatcaccgctgcacaagacattgttttccctgcaattcaaagaaatgtagaaaaccag
tcactgaaaaccttccataacgatcttccaattgtggcttctcacattgataagcagcca
acaatgggcgctttcgccatgataaaacgagcgatgttaaatggcgttttgttacaaaag
ttactagaagactaa
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