Vibrio parahaemolyticus UCM-V493: VPUCM_2489
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Entry
VPUCM_2489 CDS
T03116
Name
(GenBank) tRNA-i(6)A37 methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2489
Enzymes [BR:
vph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
VPUCM_2489
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
VPUCM_2489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AHJ00448
LinkDB
All DBs
Position
1:2679572..2680957
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AA seq
461 aa
AA seq
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MNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLKDKK
PGVVIGVGGCVATQEGDHIRERAPYVDVIFGPQTLHRLPEMIKQSQTDDAPVMDISFPEI
EKFDRLPEPRAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQLAEQGV
REVNLLGQNVNAYRGPMHDGEICSFAELLRLVASIDGIDRIRFTTSHPLEFTDDIIAVYE
DTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGE
TDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDIPEQVKKERLYELQQTINAQA
MRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIGQFVDVKITDVFAN
SLRGELVRTEKDMDLRSVISPTQMMAKTRREDELGVATFTP
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatacgattcatcaaaaatggccgacctgcttaatgctgcaaacggctatgag
ctgacggaagagccagaggaagcagacgtacttctacttaacacctgttcgatccgtgaa
aaagcgcaagaaaaagttttccaccagctaggccgttggaaaacactaaaagataaaaaa
cctggcgtagttatcggtgtaggtggttgtgtagcaacacaagaaggtgaccacatccgt
gagcgtgcaccatacgttgacgtaatctttggccctcaaactctgcaccgcctacctgag
atgatcaaacaatctcaaactgacgatgctccggtaatggacatttcgttcccagagatt
gaaaagttcgaccgcctacctgagccacgtgcagaaggtgcgacggcgtttgtttctatc
atggaaggctgttcaaaatactgtacttactgcgttgtaccatacactcgtggtgaagaa
gttagtcgaccaatggatgacgtgttattcgagattgcacagctagcggaacaaggtgta
cgtgaagttaacctactaggtcaaaacgtaaacgcataccgtggccctatgcacgacggc
gagatctgctcttttgctgaactgcttcgtctcgttgcatctattgatggtatcgaccgt
attcgtttcacgactagccacccgctagagtttacagacgacatcattgctgtttatgaa
gatacaccagagctagtaagcttcctgcacttgccagtacaaagtggtagtgaccgtatt
ctaacgatgatgaagcgtcctcacacagctatcgagtacaagtcaatcatccgtaaacta
cgtaaagcgcgtcctgatatccaaatcagttctgactttattgttggtttccctggtgaa
acagacaaagatttccaagacacaatgaagctaatcaaagacgtagactttgacatgagc
ttcagctttatcttctcacctcgtcctggtacaccagcggcagattacccttgtgatatt
ccagagcaagtgaagaaagagcgtctatacgagctgcaacaaaccatcaatgcacaagca
atgcgttactcacgcctaatgcttggtactgagcagcgtgtactggttgaaggcccttct
aagaaaaacctaatggaactgcgcgctcgtacagaaaacaaccgtgtagtaaactttgaa
ggtagcgcagacctaattggtcagttcgttgacgtgaagattacggacgtatttgcaaac
tcgctacgtggtgagctagtacgtacagaaaaagacatggaccttcgtagtgtgatttct
ccaacacaaatgatggcgaaaacacgtcgcgaagatgagctaggtgtagctacttttacg
ccataa
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