Vibrio parahaemolyticus UCM-V493: VPUCM_2507
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Entry
VPUCM_2507 CDS
T03116
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00260
Glycine, serine and threonine metabolism
vph00460
Cyanoamino acid metabolism
vph00630
Glyoxylate and dicarboxylate metabolism
vph00670
One carbon pool by folate
vph00680
Methane metabolism
vph01100
Metabolic pathways
vph01110
Biosynthesis of secondary metabolites
vph01120
Microbial metabolism in diverse environments
vph01200
Carbon metabolism
vph01230
Biosynthesis of amino acids
vph01240
Biosynthesis of cofactors
vph04981
Folate transport and metabolism
Module
vph_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VPUCM_2507
09102 Energy metabolism
00680 Methane metabolism
VPUCM_2507
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VPUCM_2507
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VPUCM_2507
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VPUCM_2507
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VPUCM_2507
Enzymes [BR:
vph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VPUCM_2507
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AHJ00466
LinkDB
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Position
1:complement(2698706..2699956)
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AA seq
416 aa
AA seq
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MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEQLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGEYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQARVVKNAKAMVGQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKDLANWMCDVLDNIGNEEVIEATKQKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggaactgttcgcagctatccag
gaagaaacccttcgccaggaagaacacattgaacttatcgcttctgaaaactacacaagc
ccacgtgtaatggaagcgcaaggttctcagctaacgaacaaatacgctgaaggctaccca
ggcaagcgttactacggcggttgtgagtacgtagataaagcagaacagcttgctatcgat
cgtgcatgcaaactattcggttgtgagtacgcgaacgtacaacctcactcaggttctcaa
gcaaacagcgcagtttacatggcgcttcttaacccaggcgatacagtactaggtatgagc
ctagcgcacggtggtcacctgactcacggttctccagtaaacttctctggtaagcattac
aacgttatcccttacggtatcgatgaagcgggtcaaatcaattacgacgagatggaacag
ctagcgcttgagcacaagcctaagatgatcatcggtggtttctctgcttactcgcaaatc
gttgattggaagcgcatgcgtgaaatcgcggacaaagtagatgcttaccttttcgttgat
atggcacacgtagctggtcttatcgcagcaggcgaatacccaacacctgttccacacgct
cacgtagtaacaacaacgacgcacaaaacactagcaggccctcgcggtggtcttatcttg
tctaatgctggcgaagatatgtacaagaagctgaactcagctgtgttccctggtggtcaa
ggtggccctctaatgcacgttatcgctggtaaagcagtagcgttcaaagaagcgatggag
ccagagttcaaagcttaccaagctcgcgtagtgaaaaacgcaaaagcaatggttggtcag
ttccaagagcgtggctacaaaatcgtatctaacggcacagaaaaccacttgttccttgtt
gatctaatcgacaaagacatcactggtaaagatgcagacgcggcactaggtgcagcaaac
atcacagtaaacaagaactcagtaccaaatgacccacgcagcccattcgtaacgtctggt
attcgtgtaggtacaccagcgatcactcgtcgtggctttactgaagaagacgcaaaagat
ctagcaaactggatgtgtgacgttctagataacatcggcaacgaagaagttatcgaagcg
actaagcagaaagtattagaaatctgtaagcgtctgccggtttacgcctaa
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