Vibrio parahaemolyticus UCM-V493: VPUCM_2513
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Entry
VPUCM_2513 CDS
T03116
Name
(GenBank) Trehalose operon transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vph03000
]
VPUCM_2513
Transcription factors [BR:
vph03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VPUCM_2513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_4
Peripla_BP_1
SpoIIID
HTH_3
HTH_IclR
HGD-D
HTH_7
AAA_18
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AHJ00472
LinkDB
All DBs
Position
1:complement(2707027..2707974)
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AA seq
315 aa
AA seq
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MSKKLTILDIAKLAGVGKSTVSRVLTNDPKVKPQTREKVEQIIRESGYVPSKSAQSMRGG
SQKVIGVIISRLDSPSENRAVGTMLNALYSAGYDAVIMESQFDRDKTNEHLNVLKRRNVD
GVIVFGFTGCDEQALAEWGNRIVVIAMDTNNVSSINYDNQGVIDMALSHLEQQSLSRIAY
IGVDPEDKTTGLARLNAYKAWCQRKQLTPCFQTGKLSHESAYQLVDHVLKADTQAIVCAS
DTIALGVIKRLQELGREDVVVTGVGGNELLSFLFPKVFSVDPGYTLAGEKSAKMLINQLN
GDEEVVHFTQHPVCR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactcactattcttgatatcgcgaaactggcaggcgttggcaaatcaaca
gtaagccgtgtgcttaccaacgatccaaaagtgaaacctcaaacgcgagagaaagtagag
caaatcattcgtgaatctggctatgtaccgtccaaatctgcgcaatcaatgcgaggcggt
agccaaaaagtcatcggtgttatcatctcccgtctggactcgccatccgaaaatcgcgct
gttggtacaatgctcaatgcattgtattccgctggttatgatgcggtgatcatggagagc
caatttgatcgcgacaaaaccaacgagcatctaaacgtgcttaagcgtcgcaatgtggat
ggggtgattgtgtttggctttactgggtgcgatgagcaagccttagctgagtggggcaat
cgcattgtggtgattgcgatggataccaataacgtctcttccatcaattatgataaccaa
ggcgtgatagacatggctttgtctcatcttgagcagcaatctctctctcgcattgcttat
attggtgttgatcctgaagacaaaaccacaggcttggcgcgtttaaatgcttataaagct
tggtgtcaacgtaaacaactcacaccttgtttccaaaccggtaagcttagccatgaaagt
gcttatcaattggtggatcacgttctaaaagcagacacgcaagccattgtgtgtgccagc
gataccattgcattgggcgtaattaagcgtcttcaagagttaggccgtgaagacgtggtc
gtgacaggcgtgggtggtaacgagttgctgtctttccttttccctaaagtatttagtgtt
gacccgggttatacccttgcgggtgaaaagtccgctaagatgctgattaatcaattaaat
ggcgatgaagaagtcgttcacttcactcaacatcctgtttgccgttaa
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