Vibrio parahaemolyticus UCM-V493: VPUCM_2534
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Entry
VPUCM_2534 CDS
T03116
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VPUCM_2534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vph03400
]
VPUCM_2534
Enzymes [BR:
vph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VPUCM_2534
DNA repair and recombination proteins [BR:
vph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VPUCM_2534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
COMM_domain
Vps53_N
LRIM1_dimer
Motif
Other DBs
NCBI-ProteinID:
AHJ00493
LinkDB
All DBs
Position
1:2728825..2729067
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AA seq
80 aa
AA seq
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MAVKKPENMTFEATIEELDSLVDQLENGDLALDDALRKFERGIALARAGQTKLSDAEQRV
SILLSEDDEAPLSDFKPDSE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcaagaaaccagaaaacatgaccttcgaagcaaccattgaagagcttgatagc
ttggttgatcaattagaaaacggcgatcttgccctagatgatgccttacgtaaatttgaa
cgaggcattgccttagctcgtgctggccaaaccaaactgagcgacgcagaacagcgcgta
agcattcttcttagcgaagatgacgaagcccctcttagcgacttcaaaccagattcagaa
taa
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