KEGG   Vibrio parahaemolyticus UCM-V493: VPUCM_2620
Entry
VPUCM_2620        CDS       T03116                                 
Name
(GenBank) Signal recognition particle, subunit Ffh SRP54
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vph  Vibrio parahaemolyticus UCM-V493
Pathway
vph02024  Quorum sensing
vph03060  Protein export
vph03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VPUCM_2620
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VPUCM_2620
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VPUCM_2620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vph02044]
    VPUCM_2620
Enzymes [BR:vph01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     VPUCM_2620
Secretion system [BR:vph02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VPUCM_2620
  Eukaryotic Sec-SRP protein
   VPUCM_2620
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 Zeta_toxin cobW T2SSE KTI12 AAA_30 AAA_31 Mg_chelatase AAA_33 Rad17 AAA_19 AAA_24 ATP_bind_1 APS_kinase AAA_14 ABC_tran AAA_16 DUF3867 Thymidylate_kin
Other DBs
NCBI-ProteinID: AHJ00579
LinkDB
Position
1:complement(2834501..2835883)
AA seq 460 aa
MFENLTDRLSKTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVREFVNRVKEKAV
GVEVSKSLTPGQEFIKIVQAELEAVMGESNEALNLAAQPPAVLLMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLASDIGVDFFPSSPDQKPLDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEEMMGEIKDLHSAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMQNMGGMMGMLDKLPGMSQL
PSDVKDKVDDKMFKQMEAIISSMTMKERQRPEIIKGSRKKRIAAGSGVQVQDVNRLLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGGGGFNPFGR
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtttgagaatttaacggatcgattatccaaaacgctgaaaaatatcagtggcaaaggt
cgtctgaccgaagacaacattaaagaaaccctacgtgaagttcgtatggcccttttagag
gctgacgttgcacttcctgttgttcgcgaattcgtaaaccgcgttaaagaaaaagcggtt
ggcgtagaagtttctaaatccttaactccgggccaagaattcatcaagatcgttcaagca
gagcttgaagcggtaatgggtgagtctaacgaagcgcttaacctagcagcacagccgcca
gcagtacttttgatggcaggtctacaaggtgcgggtaaaaccacatcggtaggtaagcta
tctaagcttctaaaagagcgcgataagaagaaagtgcttgtggtgtctgccgacgtttac
cgtcctgcggcgatcaaacagttagaaacactagcatcagacatcggtgtcgacttcttc
ccatcttcaccagatcaaaagccacttgatattgctaacgcagcaatcgaccacgcgaag
aagaaattctacgacgtattaattgtcgataccgcgggtcgtttggctatcgatgaagaa
atgatgggggagatcaaagatcttcactcagctatcaatcctgttgagacgctgttcgtt
gttgatgcaatgacaggtcaagatgcggcgaatacagcaaaagcctttggtgatgcacta
ccacttactggtgtgattcttactaaggttgatggtgatgcgcgtggtggtgctgcgctg
tcagttcgtcatatcacgggcaagccaattaagttcttaggtgtcggtgagaaaactgac
gcactagaaccgttccaccctgatcgtgttgcatcgcgtattctaggcatgggtgacgtg
ctgtcactaatagaagacctacaacgcaatgttgaccaagaaaaagcagagaagctagcg
aagaagttcaaagagaagaaaggtttcgaccttgaagacttccgtgaacagctaggtcaa
atgcaaaacatgggtggcatgatgggcatgctagacaagctaccaggtatgtctcagcta
ccatctgacgtgaaagacaaagtcgatgacaagatgtttaagcaaatggaagcgatcatc
agctcaatgacgatgaaagagcgtcaacgtcctgaaatcattaaaggttcgcgtaaaaag
cgtatcgctgcaggttcaggtgtacaggttcaagatgttaaccgtctactgaagcagttt
acccaaatgcagaagatgatgaagaaaatgcagaagggcggcatgaaaggcatgatgcgt
aacatgcaaggcatgatgggcggtatgggtggaggcggcggcttcaatccatttggtcga
taa

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