Vibrio parahaemolyticus UCM-V493: VPUCM_2644
Help
Entry
VPUCM_2644 CDS
T03116
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2644
Enzymes [BR:
vph01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VPUCM_2644
Transfer RNA biogenesis [BR:
vph03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VPUCM_2644
Prokaryotic type
VPUCM_2644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHJ00603
LinkDB
All DBs
Position
1:complement(2863887..2864930)
Genome browser
AA seq
347 aa
AA seq
DB search
MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSTFLAQYPSIEILATDRH
NKKLRPGDLIGNEFVVTLSEVTDVADVEQRLEKVKQVGVPNYFGSQRFGNDGNNLDEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLENGVFDKFIDGDIAQTSQGLLAVDAN
NLADMQNKLALSDVEITAALAGDNALPTQADALALEQPFIDEEPDLMALIRGNRMRHDRR
EIALKPKDLAWNVEGNNITLTFSLDAGSFATSIVRELVNEVKVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcctcattggcttacctcacaggcaagccagtcgcatcagcaaaa
attaaagcgcaaccagaacactttcaggttcgcgaagatttgggttttgccttcacggga
gaaggtgaacacttaatggtgcgcattcgaaaaacaggtgagaacaccagtttcgtcgct
aacgagctagcgaaagcttgtggtgttaagtctaaagacgttagttgggcaggcctgaaa
gatcgccatgcagtaaccgaacaatggctaagtgttcatctgcctaaaggtgagactcca
gatttttcgacatttttggcgcaatacccaagtattgaaattctagcgaccgatcgacac
aacaaaaaactgcgtcctggtgacttaatcgggaacgagtttgtggttaccttgtctgaa
gtgacagatgtggcggatgtagagcaacgccttgaaaaagttaaacaagttggtgtgcca
aactactttggtagccaacgttttggtaacgatggaaataacctcgacgaagcccgtcgt
tggggacgagagaacgttcgcacgcgtaaccaaaacaaacgcagcatgtacctgtctgcc
gcgcgttcatggatcttcaaccgcatcgtttctgctcgtctagaaaatggtgtgtttgat
aaattcatcgatggtgacatcgcacagacatcacaaggattgttggctgttgatgcgaat
aaccttgctgatatgcaaaacaagcttgcattgagtgacgttgagattactgccgcttta
gcgggtgataatgcgttaccgacccaagctgatgcacttgcattagaacaaccatttatt
gatgaagaacctgatttaatggctctgatccgtgggaatcgtatgcgtcacgatcgtcgt
gaaatcgcactcaaaccaaaagacttagcttggaacgttgaaggtaacaatattacgttg
accttctcactcgatgcaggctcttttgccacatccattgttcgtgagttggtgaatgag
gtcaaagtagaaagagaatactaa
DBGET
integrated database retrieval system
