Vibrio parahaemolyticus UCM-V493: VPUCM_2685
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Entry
VPUCM_2685 CDS
T03116
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vph02000
]
VPUCM_2685
Transporters [BR:
vph02000
]
Other transporters
Pores ion channels [TC:
1
]
VPUCM_2685
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
ADAMTS_spacer1
Motif
Other DBs
NCBI-ProteinID:
AHJ00644
LinkDB
All DBs
Position
1:complement(2907562..2909520)
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AA seq
652 aa
AA seq
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MSTLRLPVLTATGVLAFVSVPHVFANDSVSKMETVVVTASSYEQSQADAPASISVISREE
LDSRYYRDVTDALKSVPGVVVTGGGDTTDISIRGMGSKYTLILVDGKRQSTRETRPNSDG
PGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINVITRKDALEWTGNVQLGTVIQE
NSRSGGEQSANFFVNGPLTENLLLQVYGQYTAREEDDIDYGYEDKDMQSISSKLIYQIND
RHSVQLEGGTSAQSRRGNVGLSVPTTGCRRGCEDSLNEYRRNYVTLSHTGEWELLGNSDT
YLQREESENKSREMTIVNTTFKSSLVKGLGAHTLTTGVDATHAELEDFTSNKASSKTKAS
NTQWAVFIEDEWKIAEPFSLTLGGRLDHDENYGAHFSPRVYGVWRVDPAWTVKGGVATGF
RSPQLREITPGWAQVSGGGNIYGNPDLDPETSLNKEISVLYQGDSGLDVTLTAFHNEFKD
KITRVVCPDTICTDGPNQWGADPTYRINVDEAVTQGVEATLAKPLTETIYLSSSYTFTDS
EQKTGEYKGMPLQQLPKHLFNVDVTWQTTDNLESWTKVTYRGKEMDPVTGPSRNSIVEPA
YTFVDAGVTYQLTDNTKIKGAIYNLFDEDINYKEYGYVEDGRRYWLGLDVAF
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcttagactgccagtgctaactgcaactggtgttttagccttcgtcagtgtc
cctcatgtatttgctaacgactcagtttctaaaatggaaaccgtcgtggtgacagcgtca
agttatgagcaatcccaagcggatgcgcctgcaagtattagtgttatctcgcgagaagaa
ttggactcgcgctactaccgcgacgtgactgatgcactgaaaagtgtgccgggtgttgtt
gtgactggtggtggtgatacaaccgatatcagcattcgtggtatgggctctaagtacacg
ttaattcttgtggatggtaagcgccaaagtactcgcgaaactcgcccaaatagcgatggc
cctggtattgaacaaggttggttgccaccacttcaagccattgagcgaatcgaagtgatc
cgcggcccgatgtcgacgctgtatggttccgatgcgattggtggtgtgattaacgtgatc
acccgtaaagatgcgcttgagtggacaggtaatgtgcagctggggacggttatccaagaa
aacagccgttctggtggtgaacagagtgcaaacttctttgtaaatggccctcttacagaa
aacttgttgctacaggtttatggtcaatacaccgcaagggaagaagatgacattgattat
ggttatgaagacaaagatatgcagagcatctcttcaaaattgatctatcaaatcaatgac
cgtcactctgtgcagttagagggtggtacatcggcacaaagtcgtcgcggtaatgttggt
ctttctgtacctacgactggctgtcgtagaggctgtgaagattcattgaatgaataccgt
cgtaactacgttacgcttagtcacaccggggagtgggagttattgggtaactctgatacc
tacttgcagcgcgaggagagtgaaaacaaatctcgcgaaatgactattgtaaacaccacg
tttaaatccagcctagttaaagggttgggcgcgcatactcttacaactggtgtcgatgcg
acgcatgccgagttggaagattttacgtctaacaaagcatcatctaaaacgaaagcatca
aatacacaatgggctgtgttcatcgaagatgaatggaagatcgcagaaccttttagtctg
acattaggtggtcgtttggatcacgatgaaaactacggcgcgcattttagcccgagagtg
tatggtgtgtggcgtgttgatcctgcttggacggtcaaaggcggtgtggcgacaggcttc
cgctctcctcagttacgtgaaattaccccaggttgggcgcaagtcagtggtggcggcaat
atttatggtaacccagatttggatccggaaacttcactgaacaaagaaatcagtgtgctt
taccaaggtgattctggtcttgatgtgacgttaaccgccttccacaatgagtttaaagat
aagattactcgcgtggtgtgcccagatacaatttgtacggatggcccaaaccaatggggg
gcagatcctacttaccgcattaatgtggatgaagctgttactcagggggtagaagcaacg
ttggcgaaaccactaaccgagactatctacttaagctcaagctatacctttaccgactcg
gagcaaaaaacgggtgaatacaaaggcatgccacttcagcaacttccaaagcacctgttt
aatgttgatgtcacttggcaaacaacagacaacctagagagctggacgaaagtgacctac
cgaggcaaagaaatggatccggtcactggcccatcacgcaacagcatcgttgaacctgct
tatacgtttgtagatgccggcgtaacgtatcagttgacggataacaccaagatcaaaggt
gcgatttacaacctgttcgatgaagacatcaactacaaagaatatgggtacgtcgaagat
ggacgtcgttactggttagggttagacgtagcattctaa
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