Vibrio parahaemolyticus UCM-V493: VPUCM_2803
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Entry
VPUCM_2803 CDS
T03116
Name
(GenBank) MSHA biogenesis protein MshE
KO
K12276
MSHA biogenesis protein MshE
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPUCM_2803
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vph02044
]
VPUCM_2803
Secretion system [BR:
vph02044
]
Type II secretion system
MSHA pilus biogenesis protein
VPUCM_2803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_16
AAA_22
AAA_11
DUF4388
AAA_30
AAA_29
AAA_23
AAA_19
Rad17
nSTAND3
NTPase_1
ATPase_2
ResIII
AAA_18
AAA_7
Zeta_toxin
DUF2949
SRP54
cobW
AAA
DEAD
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AHJ00762
LinkDB
All DBs
Position
1:complement(3034528..3036252)
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AA seq
574 aa
AA seq
DB search
MKIQLRKRLGDLLVEEGIVSEDQIQQALSAQRSTGQKLGDALIDLGFITEKQMLEFLSQQ
LGLPLIDLGRAPVDADAVQILPEVHARRLRAMVVARNGDTLRVAMSDPADLFTQESLMNL
LGEYNLEFIIASERQLISSFDRYYRRTKEIASFAEQLQAEHQDVQSFDYGIDEADSEEVT
VVKLVNSMFEDAVQVGASDIHIEPDDKVLRLRQRVDGVLHETILNEVNIASALVLRLKLM
AHLDISEKRLPQDGRFNIKVRGQSIDIRMSTLPTQYGESVVMRLLNQSSGLRPLEESGLP
PELLARLRRQLSRPHGMILVTGPTGSGKTTTLYGALSELNEPGKKIITAEDPVEYRLPRI
TQVQINSKIDLTFSRVLRTFLRQDPDIILIGEMRDQETVEIGLRAALTGHLVLSTLHTND
AVDSALRMIDMGAPGYLVASAVRAVVAQRLVRRVCPDCKTQDHLDESRQQWLAGRFPNQV
GVTFHKGAGCQNCNLTGYRGRIGVFEMLELEHEMMDKLRANDAVGFAQAARRSEKYKPLL
ASAMELALQGAVSLDEVMTLGEGDASGKTDPIFM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcagttgagaaaacgcttaggtgacctacttgttgaagaaggcatcgtatcg
gaagatcaaatccagcaagctctatccgctcagcgcagtaccggacaaaaattaggtgat
gccctgattgacctcgggtttattaccgaaaagcaaatgctggagtttttgtctcagcaa
ctaggattaccgttgatcgatcttggacgtgctccagtggatgcggatgcggtgcaaata
ctgccagaagtgcatgctcgtcgtttacgtgcaatggtggtggctcgtaatggtgacact
ttacgtgttgcgatgagtgatccggcggatctgtttacccaagagtctttaatgaacttg
ctaggtgagtacaaccttgagttcatcattgcctctgagcgtcagttgatcagcagtttc
gaccgttactaccgccgtactaaagagatcgcgtcctttgctgagcagttacaagcagag
caccaagacgtacaaagctttgactatggcatcgatgaagccgacagtgaagaagtcacc
gttgtaaaactggttaattcgatgtttgaagacgcggtgcaagttggtgcatcggatatc
catatcgaaccagacgataaagtcttgcgtttacgccagcgtgtcgatggtgtgctgcat
gaaaccattctgaacgaagtgaacatcgcttctgcattggtattacgccttaagttgatg
gcgcacttggatatttctgagaagcgtctgccgcaagatggtcgcttcaacatcaaagtt
cgtggccagtcgattgatattcgtatgtcgacgttaccgactcagtacggtgaatcggtc
gtaatgcgtctgcttaaccagtcgtcaggcttacgtccattagaagaatcgggtttaccg
cctgagctactggcgcgcttgcgtcgtcagttatctcgtcctcatggcatgattttggta
accggccctacggggtcgggtaaaaccacgacactttacggtgcgttgagcgagctcaat
gaaccgggtaaaaaaatcatcaccgcagaagatccggtggaataccgtttaccacgcatc
acgcaagtacagatcaacagcaagatcgacctgacattttcacgcgtgctacgcaccttc
ttgcgtcaagacccagacatcattttgattggtgagatgcgtgaccaagagacggtagag
attggcttgcgagcagcactaaccggccacttagtattgagtacgttgcacaccaacgat
gcggtcgacagtgcgttgcgtatgatcgacatgggagcgccaggctatctcgttgccagt
gccgtgcgtgccgttgtggctcagcgattggttcgccgtgtttgtccagattgtaaaacc
caagatcatctcgatgagtcgcgtcaacaatggttagcggggcgttttccaaatcaagtt
ggggtgactttccacaaaggcgctggttgtcaaaactgtaatttgacggggtatcgaggt
cgaatcggtgtgtttgaaatgcttgagctggaacatgagatgatggacaagctgcgtgcg
aatgatgcggttggctttgcacaagcggctcgacgttcagaaaaatacaaaccgcttctt
gcctcagcaatggagcttgcgctgcaaggtgctgtgagcctggatgaagtgatgaccctc
ggcgagggtgacgcttcgggtaaaactgatcccattttcatgtag
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