Vibrio parahaemolyticus UCM-V493: VPUCM_2877
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Entry
VPUCM_2877 CDS
T03116
Name
(GenBank) tRNA 5-methylaminomethyl-2-thiouridine synthase TusD
KO
K07235
tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VPUCM_2877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2877
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
VPUCM_2877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DsrE
Motif
Other DBs
NCBI-ProteinID:
AHJ00836
LinkDB
All DBs
Position
1:complement(3126159..3126554)
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AA seq
131 aa
AA seq
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MGGLTYTLVVNGSVYGSQSARSAYQFAQAVIEQGHTLVSVFFYQDGVTNGTALSVPANDE
FDLTKAWQGLAKEHDVRLETCVAAALRRGIISEDEATQHGLTQNNLAEGFVQAGLGSLAE
AMLTQDRVVQF
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggattaacttacacgctggtggtaaatggctctgtttacggcagccaatcggca
cgcagcgcataccaattcgcacaagcagtcattgaacaagggcatactctggtgagtgtg
ttcttttatcaagatggtgtgactaacggtacagcgttaagtgtgccagctaatgatgag
tttgatttgactaaagcatggcaaggtctcgctaaagaacatgatgtgcgtttggaaacg
tgtgtcgctgcagcgctgcgtcgtggcatcattagtgaggatgaagccactcaacatggt
ttaacacaaaacaatcttgcagaaggttttgtacaagcgggtttgggcagtctagccgaa
gcgatgttaacccaagacagagtggtacagttttga
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